Lumbricus rubellus

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Home of the Lumbricus rubellus genome project
@ The Blaxter Lab, Institute of Evolutionary Biology, School of Biological Sciences, The University of Edinburgh
Blaxter lab main site

LumbriBASE
Library specific searches



" ; printf("%s", pg_errormessage( $dbconn ) ); exit(); } $sqlcom="select name from lib;"; $dbres = pg_exec($dbconn, $sqlcom ); if ( ! $dbres ) { echo "Error : " + pg_errormessage( $dbconn ); exit(); } $rowmax=pg_NumRows($dbres); if ($rowmax>$max) {$max=$rowmax;} $colspan=$max+2; ################################################################################################################### ####draw the MAIN table with library selection options############################################################# ################################################################################################################### ####header line#### print"First enter values to limit your cluster search to specific libraries and expression levels \n"; print"(Help)

\n"; print"\n"; print"\n"; //open the database $dbconn=pg_connect( "dbname=$PG_DATABASE host=$PG_HOST port=$PG_PORT user=$PG_USER password=$PG_PASS" ); if ( ! $dbconn ) { echo "Error connecting to the database !
" ; printf("%s", pg_errormessage( $dbconn ) ); exit(); } $sqlcom="select lib_id,count(library),organism,sex,stage,handle from lib,est where library=lib_id group by lib_id,organism,sex,stage,handle order by stage,sex;"; # print "$sqlcom
"; $dbres = pg_exec($dbconn, $sqlcom ); if ( ! $dbres ) { echo "Error : " + pg_errormessage( $dbconn ); exit(); } $rowmax=pg_NumRows($dbres); #print" \n"; print"\n"; print"
Select Individual Libraries
$PG_DATABASE
\n"; print"[an error occurred while processing this directive]
Output as:
Cluster Specific
Contig Specific
 Output by:
Library expression
Blast annotation
as SimiTri 		SimiTri data type
bit score
expression

HELP

Comments and suggestions to: ann.hedley@ed.ac.uk

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