Acrobeles complexus

nematodes.org - Bioinformatics

Nematode & Neglected Genomics
@ The Blaxter Lab, Institute of Evolutionary Biology, The University of Edinburgh

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MOTU_define Change log

Changes made to each version


VersionDate Changes made
the future  

# We still intend to add
# - complete windows perl fix
# - use of readline module for ease of entry of data

2.07 30th March 2007 # In version 2.07 we changed/added
# - production of sensible summaries
# - removal of subsequently useless files
2.06 [internal only]

# In version 2.06 we changed/added ...
# - started fixing the system calls so that it is Windows perl compatible
# - changed naming of resampling MOTU
# - added TABLOG log file with tabdelimited output

2.05 [internal only] # In version 2.05 we changed/added ...
# - simple way of using ./sequences as start directory
# - some tidying of comments
# - moved calling and definition of srand (thanks to Rich Challis)
2.04 21 August 2006

# In version 2.04 we changed/added ...
# - the software now first calculates a CANONICAL MOTU
# set, and then calculates resamplings if requested.
# - being able to launch vs. another directory
# - being able to save to any directory
# - sensible behaviour in case of mis-entry of data

2.03 19 July 2006 # In version 2.03 we
# - changed directory structure for saving
# - process now labels sequences with MOTU number at the
# BEGINNING of the fasta header (>) line so 2.03 is
# INCOMPATIBLE with previous versions' databases
# - added ability to use multiple cut-offs
# - fixed an error which used number 0000 as the first MOTU ID
# - removed a lot of on-screen reporting
2.02 05 July 2006 In version 2.02 we added / altered
# - user-defined minimum sequence length and overlap
# - different method for random sequence list generation
# - changed order of file sanity checks
# - caught the first file of a set of MOTU to avoid blast errors
2.01 05 July 2006
  • In version 2.01 we have added / altered
    # - use of "strict" coding
    # - check for blastall and formatdb changed
    # - ability to perform multiple cycles of inference

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    Cupiennius salei

    The spider Cupiennius salei. See the ARTHROPODA database for analyses of ESTs from this chelicerate and many other arthropods.

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