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BaNG Nematode and Neglected Genomics |
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| The Blaxter Lab at the Institute of Evolutionary Biology, University of Edinburgh | ||
A tool for generating partial gemomes
Current version 3.0.5 released on 17 October 2008
User guide Download Publications Feedback Change log Contact us PartiGene is part of the Edinburgh-EGTDC developed EST-software pipeline at the moment consisting of trace2dbEST, PartiGene, wwwPartiGene, port4EST and annot8r. PartiGene is a menu-driven, multi-step software tool which takes sequences (usually ESTs) and creates a dataabase of a non-redundant set of sequence objects (putative genes) which we term a partial genome. Version 3.0.5 corrects some bugs, and unifies some of the look-and-feel. The user guides are still v3.0.3, and are valid.
- 1. Setup
- 2. Processing sequences
- 3. Creating and updating a relational database
- 4. Post database analysis
For further deatails please see the User guide.
...other interesting things... 
The pond snail Lymnaea stagnalis. See the MOLLUSCA database for analyses of ESTs from this and many other snails and bivalves. |
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