Acrobeles complexus

nematodes.org - Bioinformatics

Nematode & Neglected Genomics
@ The Blaxter Lab, Institute of Evolutionary Biology, The University of Edinburgh

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A tool for generating partial genomes

Current version 3.0.5 released on 17 October 2008

User guide Download Publications Feedback Change log Contact us

PartiGene is part of the Edinburgh-EGTDC developed EST-software pipeline at the moment consisting of trace2dbEST, PartiGene, wwwPartiGene, port4EST and annot8r. PartiGene is a menu-driven, multi-step software tool which takes sequences (usually ESTs) and creates a dataabase of a non-redundant set of sequence objects (putative genes) which we term a partial genome. Version 3.0.5 corrects some bugs, and unifies some of the look-and-feel. The user guides are still v3.0.3, and are valid.

 
1. Setup
2. Processing sequences
3. Creating and updating a relational database
4. Post database analysis

For further details please see the User guide.



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A bumble bee on a bramble flower.
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