Acrobeles complexus

nematodes.org - Bioinformatics

Nematode & Neglected Genomics
@ The Blaxter Lab, Institute of Evolutionary Biology, The University of Edinburgh

 University of Edinburgh crest   

partigene

A tool for generating partial genomes

prot4EST

EST protein translation suite

Current version 3.0b released on 21 June 2010

DOWNLOAD from compsysbio.org

prot4EST is a suite of programs that takes expressed sequence tags (ESTs) and translates them optimally to produce putative peptides. prot4EST intergrates a number of programs to overcome problems inherent with translating ESTs. prot4EST and all of the external programs are freely available to academic researchers.

prot4EST was developed by James Wasmuth when he was a PhD student in the Blaxter lab. He is now in John Parkinson's group in Toronto, and the software is available from his website. We recommend you get the newest version - it is so much easier to use, and is much more fully featured.



Website Highlight


Daphnia magna

The waterflea Daphnia magna. See the ARTHROPODA database for analyses of ESTs from this crustacean and many other arthropods.

[nematodes.org v4.0] the content of these pages is copyright Mark Blaxter and colleagues. Contact the webmaster if there are problems.