Acrobeles complexus

nematodes.org - Bioinformatics

Nematode & Neglected Genomics
@ The Blaxter Lab, Institute of Evolutionary Biology, The University of Edinburgh

University of Edinburgh crest   

 

partigene

A tool for generating partial genomes

trace2dbEST

Turning sequence chromatograph traces into expressed sequence tags.

Current version 3.0.1 released on 14 Nov 2005

User guide Download Publications Feedback FAQs Contact us

trace2dbEST process raw sequenceing chromatograph trace files from EST projects into quality-checked sequences, ready for submission to dbEST. trace2dbEST guides you through the creation of all the necessary files for submission of ESTs to dbEST. trace2dbest makes use of other software (available free under academic licence) that you will need to have installed, namely phred, cross_match and (optionaly) BLAST.

For more details please see the trace2dbest User guide.



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Ascaris suum

The pig-parasitic nematode Ascaris suum.
Ascarids are gut and tissue parasites of a wide range of vertebrates, including humans. This species infects pigs worldwide, and can cause human disease; it is used as a model for the human parasite A. lumbricoides to which it is very closely related. See NEMBASE4 for analyses of ESTs from this parasite and many other nematodes.

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