Acrobeles complexus

nematodes.org - Bioinformatics

Nematode & Neglected Genomics
@ The Blaxter Lab, Institute of Evolutionary Biology, The University of Edinburgh

 University of Edinburgh crest   

 

partigene

A tool for generating partial genomes

wwwPartiGene

Building a web interface to Partigene databases

Current version 0.1 released on 11 January 2005

User guide Download Feedback Contact us

WebPartiGene is a tool that generates HTML, php and CGI scripts that together form a web based interface to PartiGene relational databases. WebPartiGene allows specific clusters to be retrieved from the PartiGene database by entering either a cluster identifier or an EST idenitifier. The BLAST annotation text can also be searched and limited by BLAST score. Selected clusters are displayed in graphical format, showing the alignment of constituent sequences. The display includes links to full BLAST reports, phrap assembly quality files and public depository database files. WebPartiGene is full compatible with mulit-species PartiGene databases.

Please see the User guide for further details.



Website Highlight


Boophilus microplus

The tick Boophilus microplus. See the ARTHROPODA database for analyses of ESTs from this chelicerate and many other arthropods.

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