National Center for Biotechnology Information (NCBI)
Welcome to the blast2 network service.
PEPTIDE SEQUENCE DATABASES
nr Non-redundant GenBank CDS translations+PDB+SwissProt+PIR
month All new or revised GenBank CDS translation+PDB+SwissProt+PIR
sequences released in the last 30 days
pdb PDB protein sequences
yeast Yeast (Saccharomyces cerevisiae) protein sequences.
kabat Kabat Sequences of Proteins of Immunological Interest
alu * Translations of Select Alu Repeats from REPBASE
swissprot SwissProt sequences
NUCLEOTIDE SEQUENCE DATABASES
nr Non-redundant GenBank+EMBL+DDBJ+PDB sequences
(but no EST, STS, GSS, or HTGS sequences)
month All new or revised GenBank+EMBL+DDBJ+PDB sequences released in
the last 30 days
yeast Yeast (Saccharomyces cerevisiae) genomic nucleotide sequences.
est + Non-redundant Database of GenBank+EMBL+DDBJ EST Division
sts + Non-redundant Database of GenBank+EMBL+DDBJ STS Division
htgs High Throughput Genomic Sequences
pdb PDB nucleotide sequences
vector Vector subset of GenBank
mito * Database of mitochondrial sequences, Rel. 1.0, July 1995
gss Genome Survey Sequences (includes single-pass genomic data, exon-
trapped sequences, and Alu PCR primers.
kabat Kabat Sequences of Nucleic Acid of Immunological Interest
epd Eukaryotic Promotor Database
alu *+ Select Alu Repeats from REPBASE
BLASTN 1.4.11 [24-Nov-97] [Build 24-Nov-97]
Reference: Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W.
Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol.
Biol. 215:403-10.
Notice: this program and its default parameter settings are optimized
to find nearly identical sequences rapidly. To identify weak similarities
encoded in nucleic acid, use BLASTX, TBLASTN or TBLASTX.
Query= tmpseq_1
(606 letters)
Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences
330,715 sequences; 650,005,970 total letters.
Searching..................................................done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
emb|AL008969|PFSC03017 Plasmodium falciparum DNA *** SEQU... 207 1.0e-12 2
emb|X02438|MILTMXC1 Leishmania tarentolae maxicircle D... 154 4.1e-11 3
gb|L11172|PFARPI Plasmodium falciparum RNA polymera... 248 2.7e-10 1
gb|M10126|LEIKPMAX Leishmania tarentolae kinetoplast ... 154 1.8e-09 3
emb|Z11874|CHEGZ Euglena gracilis Z Chloroplast DNA 150 1.9e-09 5
emb|AL008969|PFSC03017 Plasmodium falciparum DNA *** SEQUENCING IN
PROGRESS *** from contig 3-17, complete sequence [Plasmodium falciparum]
Length = 27,208
Plus Strand HSPs:
Score = 163 (45.0 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 79/137 (57%), Positives = 79/137 (57%), Strand = Plus / Plus
Query: 204 TTTTATTTTTGAATTGGAAACATCTTATATTTTCGAATTATTTTTTGATTGAATTAAAAA 263
|||| |||||||||||| | | | | | | | ||||| | || | || | |
Sbjct: 6028 TTTTTTTTTTGAATTGGGTAAAAACTTAACATACAATATATTTATATATATATATATATA 6087
Query: 264 TTTTACTGAATCAATTTAATATTTCTTAATACTTTTATATTATTTGTTTTCTTATTACTT 323
| || || || | ||||| || |||| | || |||| || || ||
Sbjct: 6088 TAATATGTAACACATCAATTATTTATTTTATTTTTTTAAGGTATTTTTTTTTTTTTTTTT 6147
Query: 324 GTTTGTAATTTATAAAT 340
||| | ||| ||||
Sbjct: 6148 TTTTTTCTTTTTAAAAT 6164
Score = 207 (57.2 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 95/162 (58%), Positives = 95/162 (58%), Strand = Plus / Plus
Query: 345 TAAAAATAATTAGAAATGTAAAAATTTTAAATTATTAAGGATGAAATTTAGCAATTACAT 404
|||||| | | |||| ||||||| | ||| ||| || ||| || || |
Sbjct: 16410 TAAAAAAATAAAAAAATATAAAAATATAAAAATATAAAAATAAAAAAATAAAAAAATAAA 16469
Query: 405 GGAAAAAAAAGCAATAACTTAAAGTATTAATGATAGAATTACGAGTAATTGTCATATAAT 464
|| ||||| || || | ||| ||||| | || | || || | | | |
Sbjct: 16470 AAAATAAAAATAAAAAAATAAAAAAATTAAAAAATAAAAAAATAGAAAAAATAAAAATTT 16529
Query: 465 AAAGTATTATTATATGTTCAAATTATTTTCATTCTTTTATAT 506
| ||||||||||| | | | |||| ||| ||| ||
Sbjct: 16530 TCATTATTATTATATATGTATTTATTTTTTTGTCTATTACAT 16571
emb|X02438|MILTMXC1 Leishmania tarentolae maxicircle DNA fragment
Length = 2759
Minus Strand HSPs:
Score = 114 (31.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 30/39 (76%), Positives = 30/39 (76%), Strand = Minus / Plus
Query: 605 AAGAAAATCAAAATTTAAAAATAACGCAAAAAAAATTTT 567
|| ||||||||||| |||||||| ||| ||| |||
Sbjct: 1469 AATCAAATCAAAATTAAAAAATAAATTGAAATAAAATTT 1507
Score = 154 (42.6 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 46/65 (70%), Positives = 46/65 (70%), Strand = Minus / Plus
Query: 516 ATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATATG 457
||||| ||||||| | || | |||||| | | ||||||||||| ||| ||||
Sbjct: 1590 ATAATAATATATATAATAATATAATAATAATATAATAATATAATAATATAATATAATATA 1649
Query: 456 ACAAT 452
| |||
Sbjct: 1650 ATAAT 1654
Score = 144 (39.8 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 68/117 (58%), Positives = 68/117 (58%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATAT 282
|||| |||||||||||| | ||||| | || ||| |||| | | | | |
Sbjct: 2573 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAATTAAATTAAATTAAA 2632
Query: 281 TAAATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGAT 225
| || | | | | || |||| ||| ||| | | | || | |||| ||
Sbjct: 2633 TTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTCAAAACAAATAAAAT 2689
Score = 101 (27.9 bits), Expect = 0.56, Sum P(2) = 0.43
Identities = 37/58 (63%), Positives = 37/58 (63%), Strand = Minus / Plus
Query: 526 TTATTTAGTCATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATA 469
| || || | ||||| | || || | || ||||| | | |||||||||||
Sbjct: 1606 TAATATAATAATAATATAATAATATAATAATATAATATAATATAATAATATAATAATA 1663
Score = 111 (30.7 bits), Expect = 0.56, Sum P(2) = 0.43
Identities = 47/78 (60%), Positives = 47/78 (60%), Strand = Minus / Plus
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
||||||| | || ||| ||||||||||| || || | ||| |||
Sbjct: 2654 TAAATTAAATTAAATTAAATTCAAAACAAATAAAATCGAAAACAAATAAAACCCAAAACA 2713
Query: 275 GATTCAGTAAAATTTTTA 258
||| | ||||||| |
Sbjct: 2714 AATTAAAATAAATTTTGA 2731
Score = 123 (34.0 bits), Expect = 0.0017, Sum P(2) = 0.0017
Identities = 35/48 (72%), Positives = 35/48 (72%), Strand = Minus / Plus
Query: 516 ATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATA 469
||||| | | ||||| || | ||||||| | | |||||||||||
Sbjct: 1551 ATAATATATAATATATAATATAATAAATAATATAATAATATAATAATA 1598
Score = 121 (33.4 bits), Expect = 0.0017, Sum P(2) = 0.0017
Identities = 49/80 (61%), Positives = 49/80 (61%), Strand = Minus / Plus
Query: 337 TATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAA 278
||||| || | | |||| || | ||||||||||| | ||| | | ||| |||
Sbjct: 1636 TATAATATAATATAATAATATAATAATATAAATAATATAATAATATAATAATATAATAAT 1695
Query: 277 TTGATTCAGTAAAATTTTTA 258
| || ||| | | | |
Sbjct: 1696 ATAATAATATAATAATATAA 1715
Score = 98 (27.1 bits), Expect = 1.6, Sum P(2) = 0.81
Identities = 34/52 (65%), Positives = 34/52 (65%), Strand = Minus / Plus
Query: 510 TCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
| | ||| | | | | |||||| | | ||||||||||| || ||||
Sbjct: 1671 TATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATA 1722
Score = 108 (29.8 bits), Expect = 1.6, Sum P(2) = 0.81
Identities = 32/45 (71%), Positives = 32/45 (71%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAA 297
|||| |||||||||||| | ||||| | || ||| ||||
Sbjct: 2243 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAA 2287
Score = 122 (33.7 bits), Expect = 0.0029, Sum P(2) = 0.0029
Identities = 34/46 (73%), Positives = 34/46 (73%), Strand = Minus / Plus
Query: 504 ATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| || ||| ||||||| | | ||||||||||| || ||||
Sbjct: 1653 ATATAATAATATAAATAATATAATAATATAATAATATAATAATATA 1698
Score = 119 (32.9 bits), Expect = 0.0029, Sum P(2) = 0.0029
Identities = 55/94 (58%), Positives = 55/94 (58%), Strand = Minus / Plus
Query: 381 TAATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAA 322
||||||| ||| | | | | | | | | ||| | ||| | || | |
Sbjct: 1753 TAATAATATAATAATATAATAATATAATAATATAATAATATAACAATATAATAATATAAT 1812
Query: 321 GTAATAAGAAAACAAATAATATAAAAGTATTAAG 288
|||| || | ||||||||||| | ||| |||
Sbjct: 1813 AATATAATAATATAAATAATATAATATTATCAAG 1846
Score = 104 (28.7 bits), Expect = 0.13, Sum P(2) = 0.12
Identities = 32/46 (69%), Positives = 32/46 (69%), Strand = Minus / Plus
Query: 504 ATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| || | | |||||| | | ||||||||||| || ||||
Sbjct: 1661 ATATAAATAATATAATAATATAATAATATAATAATATAATAATATA 1706
Score = 116 (32.1 bits), Expect = 0.13, Sum P(2) = 0.12
Identities = 68/124 (54%), Positives = 68/124 (54%), Strand = Minus / Plus
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
||||||| | || ||| ||||||||||| || || | ||||| || |
Sbjct: 2289 TAAATTAAATTAAATTAAATTCAAAACAAATAAAATCCAAAACAAATAAAATACAAATTA 2348
Query: 275 GATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGATGTTTCCAAT 216
||| | | || | | ||| ||| | | | || ||| | | |||
Sbjct: 2349 AATTTAAAACAAATAAAACCGAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAAT 2408
Query: 215 TCAA 212
| ||
Sbjct: 2409 TAAA 2412
Score = 126 (34.8 bits), Expect = 3.9, P = 0.98
Identities = 66/117 (56%), Positives = 66/117 (56%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATAT 282
|||| |||||||||||| | ||||| | || ||| |||| | | | | |
Sbjct: 913 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAATTAAATTAAATTAAA 972
Query: 281 TAAATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGAT 225
| || | | | | || |||| ||| ||| | | | || || | ||
Sbjct: 973 TTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATCAAAATTAAAT 1029
Score = 135 (37.3 bits), Expect = 0.69, P = 0.50
Identities = 63/108 (58%), Positives = 63/108 (58%), Strand = Minus / Plus
Query: 338 TTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAA 279
| ||| || | | | || |||| | || ||||||||||| | ||| | | |||| |
Sbjct: 1545 TAATATATAATATATAATATATAATATAATAAATAATATAATAATATAATAATATATATA 1604
Query: 278 ATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATA 231
|| | | | ||| | | | | || | | || | ||||
Sbjct: 1605 ATAATATAATAATAATATAATAATATAATAATATAATATAATATAATA 1652
gb|L11172|PFARPI Plasmodium falciparum RNA polymerase I gene, complete cds.
Length = 10,359
Minus Strand HSPs:
Score = 82 (22.7 bits), Expect = 7.1, Sum P(3) = 1.0
Identities = 22/29 (75%), Positives = 22/29 (75%), Strand = Minus / Plus
Query: 594 AATTTAAAAATAACGCAAAAAAAATTTTT 566
|| ||| | ||| |||||||||||||
Sbjct: 1622 AAGTTATAGATATATTAAAAAAAATTTTT 1650
Score = 88 (24.3 bits), Expect = 7.1, Sum P(3) = 1.0
Identities = 28/41 (68%), Positives = 28/41 (68%), Strand = Minus / Plus
Query: 512 TTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATA 472
|| ||||||||||| | | || | || || || | |||
Sbjct: 2321 TTACTTATATAAAAAAGTTAATAGAAAATGGACCAAATATA 2361
Score = 109 (30.1 bits), Expect = 7.1, Sum P(3) = 1.0
Identities = 37/56 (66%), Positives = 37/56 (66%), Strand = Minus / Plus
Query: 345 AAACAATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTA 290
||| |||||||||||| | | | ||| | ||| | | ||| || | ||||
Sbjct: 8312 AAAATATTTATAAATTATATAATATTAAAGATAAATATATTGATAAAACAAAATTA 8367
Score = 248 (68.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 84/127 (66%), Positives = 84/127 (66%), Strand = Minus / Plus
Query: 327 AAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATTGATTCAGT 268
|||||| | | ||||||| | | |||| |||||||||||| || ||||| ||
Sbjct: 858 AAACAAACCTGATTATAACAAATTAAAAGAAAGAATTAAGAAATATAAATTTGATGCAAA 917
Query: 267 AAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGATGTTTCCAATTCAAAAAT 208
||||| | |||||||||| |||||| || ||| ||| | | || ||
Sbjct: 918 TAAATTAGCATTTCAATCAAATTATAATTATGAAGAATATTTAATTTTAAGTAAAACTAT 977
Query: 207 AAAACCT 201
||||| |
Sbjct: 978 AAAACTT 984
gb|M10126|LEIKPMAX Leishmania tarentolae kinetoplast pre-edited
mitochondrial maxicircle DNA complete transcribed region and flanks.
Length = 20,992
Minus Strand HSPs:
Score = 114 (31.5 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 30/39 (76%), Positives = 30/39 (76%), Strand = Minus / Plus
Query: 605 AAGAAAATCAAAATTTAAAAATAACGCAAAAAAAATTTT 567
|| ||||||||||| |||||||| ||| ||| |||
Sbjct: 19702 AATCAAATCAAAATTAAAAAATAAATTGAAATAAAATTT 19740
Score = 154 (42.6 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 46/65 (70%), Positives = 46/65 (70%), Strand = Minus / Plus
Query: 516 ATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATATG 457
||||| ||||||| | || | |||||| | | ||||||||||| ||| ||||
Sbjct: 19823 ATAATAATATATATAATAATATAATAATAATATAATAATATAATAATATAATATAATATA 19882
Query: 456 ACAAT 452
| |||
Sbjct: 19883 ATAAT 19887
Score = 144 (39.8 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 68/117 (58%), Positives = 68/117 (58%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATAT 282
|||| |||||||||||| | ||||| | || ||| |||| | | | | |
Sbjct: 20806 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAATTAAATTAAATTAAA 20865
Query: 281 TAAATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGAT 225
| || | | | | || |||| ||| ||| | | | || | |||| ||
Sbjct: 20866 TTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTCAAAACAAATAAAAT 20922
Score = 82 (22.7 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 22/29 (75%), Positives = 22/29 (75%), Strand = Minus / Plus
Query: 599 ATCAAAATTTAAAAATAACGCAAAAAAAA 571
||||||||||||||| | | |||||
Sbjct: 8232 ATCAAAATTTAAAAAACAAAACAGAAAAA 8260
Score = 122 (33.7 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 34/46 (73%), Positives = 34/46 (73%), Strand = Minus / Plus
Query: 504 ATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| || ||| ||||||| | | ||||||||||| || ||||
Sbjct: 18123 ATATAATAATATAAATAATATAATAATATAATAATATAATAATATA 18168
Score = 135 (37.3 bits), Expect = 0.00084, Sum P(3) = 0.00084
Identities = 63/108 (58%), Positives = 63/108 (58%), Strand = Minus / Plus
Query: 338 TTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAA 279
| ||| || | | | || |||| | || ||||||||||| | ||| | | |||| |
Sbjct: 19778 TAATATATAATATATAATATATAATATAATAAATAATATAATAATATAATAATATATATA 19837
Query: 278 ATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATA 231
|| | | | ||| | | | | || | | || | ||||
Sbjct: 19838 ATAATATAATAATAATATAATAATATAATAATATAATATAATATAATA 19885
Score = 102 (28.2 bits), Expect = 0.79, Sum P(2) = 0.55
Identities = 42/69 (60%), Positives = 42/69 (60%), Strand = Minus / Plus
Query: 527 TTTATTTAGTCATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATAC 468
| || | | || | | | ||| | | | | |||||| | | |||||||||||
Sbjct: 18019 TATAATAATACAAATAATATAATAATATAATAGTATAATAATATAATAATATAATAATAT 18078
Query: 467 TTTATTATA 459
|| ||||
Sbjct: 18079 AATAATATA 18087
Score = 118 (32.6 bits), Expect = 0.79, Sum P(2) = 0.55
Identities = 66/119 (55%), Positives = 66/119 (55%), Strand = Minus / Plus
Query: 380 AATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAAG 321
||||| | ||| || | ||| | ||||| | || | | | ||
Sbjct: 18872 AATAAATCCAAAATTAAATTAAATTAAATTAAATTAAATTAAAATAAATTAAATTAAAAT 18931
Query: 320 TAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATTGATTCAGTAAAATT 262
||| ||||||||||| || || | ||||| || | ||| | | |||||
Sbjct: 18932 TAAATTCAAAACAAATAAAATCCAAAACAAATAAAATACAAATTAAATTAAATTAAATT 18990
Score = 101 (27.9 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 37/58 (63%), Positives = 37/58 (63%), Strand = Minus / Plus
Query: 526 TTATTTAGTCATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATA 469
| || || | ||||| | || || | || ||||| | | |||||||||||
Sbjct: 19839 TAATATAATAATAATATAATAATATAATAATATAATATAATATAATAATATAATAATA 19896
Score = 111 (30.7 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 47/78 (60%), Positives = 47/78 (60%), Strand = Minus / Plus
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
||||||| | || ||| ||||||||||| || || | ||| |||
Sbjct: 20887 TAAATTAAATTAAATTAAATTCAAAACAAATAAAATCGAAAACAAATAAAACCCAAAACA 20946
Query: 275 GATTCAGTAAAATTTTTA 258
||| | ||||||| |
Sbjct: 20947 AATTAAAATAAATTTTGA 20964
Score = 99 (27.4 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 39/63 (61%), Positives = 39/63 (61%), Strand = Minus / Plus
Query: 521 TAGTCATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATT 462
|||| | | | ||| | | | | |||||| | | ||||||||||| || |
Sbjct: 18049 TAGTATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATAATAAT 18108
Query: 461 ATA 459
|||
Sbjct: 18109 ATA 18111
Score = 114 (31.5 bits), Expect = 2.7, Sum P(2) = 0.93
Identities = 74/138 (53%), Positives = 74/138 (53%), Strand = Minus / Plus
Query: 395 CTAAATTTCATCCTTAATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTA 336
| ||||| || | || || | ||| ||| | || | ||||| | |
Sbjct: 19252 CAAAATTAAATTCAAAACAAATAAAATCCAAAACAAATACAAATTAAATTAAATTAAATT 19311
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
|| | | | || ||| ||||||||||| || || ||| |||
Sbjct: 19312 AAATTAAATCAAAATTAAATTCAAAACAAATAAAATCCAAAACGAGTAAAAGCCAAAACA 19371
Query: 275 GATTCAGTAAAATTTTTA 258
||| | ||||||| |
Sbjct: 19372 AATTAAAATAAATTTTGA 19389
Score = 123 (34.0 bits), Expect = 0.011, Sum P(2) = 0.011
Identities = 35/48 (72%), Positives = 35/48 (72%), Strand = Minus / Plus
Query: 516 ATAATTTCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATA 469
||||| | | ||||| || | ||||||| | | |||||||||||
Sbjct: 19784 ATAATATATAATATATAATATAATAAATAATATAATAATATAATAATA 19831
Score = 121 (33.4 bits), Expect = 0.011, Sum P(2) = 0.011
Identities = 49/80 (61%), Positives = 49/80 (61%), Strand = Minus / Plus
Query: 337 TATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAA 278
||||| || | | |||| || | ||||||||||| | ||| | | ||| |||
Sbjct: 19869 TATAATATAATATAATAATATAATAATATAAATAATATAATAATATAATAATATAATAAT 19928
Query: 277 TTGATTCAGTAAAATTTTTA 258
| || ||| | | | |
Sbjct: 19929 ATAATAATATAATAATATAA 19948
Score = 98 (27.1 bits), Expect = 0.94, Sum P(2) = 0.61
Identities = 34/52 (65%), Positives = 34/52 (65%), Strand = Minus / Plus
Query: 510 TCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
| | ||| | | | | |||||| | | ||||||||||| || ||||
Sbjct: 17929 TATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATA 17980
Score = 121 (33.4 bits), Expect = 0.94, Sum P(2) = 0.61
Identities = 49/80 (61%), Positives = 49/80 (61%), Strand = Minus / Plus
Query: 337 TATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAA 278
||||| || | | |||| || ||||||||||||| | ||| | ||| |||
Sbjct: 18001 TATAATATAATATAATAATATAATAATACAAATAATATAATAATATAATAGTATAATAAT 18060
Query: 277 TTGATTCAGTAAAATTTTTA 258
| || ||| | | | |
Sbjct: 18061 ATAATAATATAATAATATAA 18080
Score = 98 (27.1 bits), Expect = 0.018, Sum P(2) = 0.018
Identities = 34/52 (65%), Positives = 34/52 (65%), Strand = Minus / Plus
Query: 510 TCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
| | ||| | | | | |||||| | | ||||||||||| || ||||
Sbjct: 17937 TATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATA 17988
Score = 143 (39.5 bits), Expect = 0.018, Sum P(2) = 0.018
Identities = 71/124 (57%), Positives = 71/124 (57%), Strand = Minus / Plus
Query: 381 TAATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAA 322
||||||| ||| | | | | | | | | ||| | | ||| | || | |
Sbjct: 18062 TAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATAAT 18121
Query: 321 GTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATTGATTCAGTAAAATT 262
|||| || | ||||||||||| | ||| | | ||| ||| | || ||| | |
Sbjct: 18122 AATATAATAATATAAATAATATAATAATATAATAATATAATAATATAATAATATAATAAT 18181
Query: 261 TTTA 258
| |
Sbjct: 18182 ATAA 18185
Score = 98 (27.1 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 34/52 (65%), Positives = 34/52 (65%), Strand = Minus / Plus
Query: 510 TCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
| | ||| | | | | |||||| | | ||||||||||| || ||||
Sbjct: 18141 TATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATA 18192
Score = 114 (31.5 bits), Expect = 3.3, Sum P(2) = 0.96
Identities = 62/111 (55%), Positives = 62/111 (55%), Strand = Minus / Plus
Query: 394 TAAATTTCATCCTTAATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTAT 335
||||| | | ||| | | ||||| | | || || || || || |
Sbjct: 18874 TAAATCCAAAATTAAATTAAATTAAATTAAATTAAATTAAAATAAATTAAATTAAAATTA 18933
Query: 334 AAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAAT 284
|| | | || || || ||||||||||| ||| || | | ||||
Sbjct: 18934 AATTCAAAACAAATAAAATCCAAAACAAATAAAATACAAATTAAATTAAAT 18984
Score = 102 (28.2 bits), Expect = 1.3, Sum P(2) = 0.74
Identities = 34/51 (66%), Positives = 34/51 (66%), Strand = Minus / Plus
Query: 510 TCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTAT 460
| | ||| | | | | |||||| | | ||||||||||| ||||||
Sbjct: 18149 TATAATAATATAATAATATAATAATATAATAATATAATAATATAATATTAT 18199
Score = 115 (31.8 bits), Expect = 1.3, Sum P(2) = 0.74
Identities = 63/113 (55%), Positives = 63/113 (55%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATAT 282
|||| |||||||||||| | ||||| | || ||| |||| | | | | |
Sbjct: 18850 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAATTAAATTAAATTAAA 18909
Query: 281 TAAATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATA 229
| || | | | |||| | | | ||| || || |||| | |
Sbjct: 18910 TTAAAATAAATTAAATTAAAATTAAATTCAAAACAAATAAAATCCAAAACAAA 18962
Score = 98 (27.1 bits), Expect = 9.3, Sum P(2) = 1.0
Identities = 34/52 (65%), Positives = 34/52 (65%), Strand = Minus / Plus
Query: 510 TCTTATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
| | ||| | | | | |||||| | | ||||||||||| || ||||
Sbjct: 19904 TATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATA 19955
Score = 108 (29.8 bits), Expect = 9.3, Sum P(2) = 1.0
Identities = 32/45 (71%), Positives = 32/45 (71%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAA 297
|||| |||||||||||| | ||||| | || ||| ||||
Sbjct: 20476 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAA 20520
Score = 96 (26.5 bits), Expect = 9.3, Sum P(2) = 1.0
Identities = 32/48 (66%), Positives = 32/48 (66%), Strand = Minus / Plus
Query: 506 ATATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| | | | | |||||| | | ||||||||||| || ||||
Sbjct: 18137 ATAATATAATAATATAATAATATAATAATATAATAATATAATAATATA 18184
Score = 110 (30.4 bits), Expect = 9.3, Sum P(2) = 1.0
Identities = 74/139 (53%), Positives = 74/139 (53%), Strand = Minus / Plus
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
||||||| | || ||| ||||||||||| || || | || || | |
Sbjct: 19630 TAAATTAAATTAAATTAAATTCAAAACAAATAAAATCGAAATTAAAAATAAAAAAATTAA 19689
Query: 275 GATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGATGTTTCCAAT 216
|| | || | ||| || ||||| | ||||| || || | ||
Sbjct: 19690 AATAAAAACTAAAATCAAATCAAAATTAAAAAATAAATTGAAATAAAATTTGAATAAAAA 19749
Query: 215 TCAAAAATAAAACCTTCCA 197
|| |||| || | |
Sbjct: 19750 AATTAACAAAAATCTGCAA 19768
Score = 104 (28.7 bits), Expect = 0.39, Sum P(2) = 0.32
Identities = 32/46 (69%), Positives = 32/46 (69%), Strand = Minus / Plus
Query: 504 ATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| || | | |||||| | | ||||||||||| || ||||
Sbjct: 18131 ATATAAATAATATAATAATATAATAATATAATAATATAATAATATA 18176
Score = 120 (33.2 bits), Expect = 0.39, Sum P(2) = 0.32
Identities = 48/78 (61%), Positives = 48/78 (61%), Strand = Minus / Plus
Query: 361 ATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAAGTAATAAGAAAACAAATAAT 302
| | | || || | ||| || | |||||| ||| || ||| |||||||||||
Sbjct: 19492 AATCCAAAATAAAATCAAATAAAATCGAAATTAAAAAAAATTAAGTTTAAAACAAATAAA 19551
Query: 301 ATAAAAGTATTAAGAAAT 284
| || | | ||||
Sbjct: 19552 ACCGAAATTAAATTAAAT 19569
Score = 122 (33.7 bits), Expect = 0.018, Sum P(2) = 0.018
Identities = 34/46 (73%), Positives = 34/46 (73%), Strand = Minus / Plus
Query: 504 ATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| || ||| ||||||| | | ||||||||||| || ||||
Sbjct: 19886 ATATAATAATATAAATAATATAATAATATAATAATATAATAATATA 19931
Score = 119 (32.9 bits), Expect = 0.018, Sum P(2) = 0.018
Identities = 55/94 (58%), Positives = 55/94 (58%), Strand = Minus / Plus
Query: 381 TAATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAA 322
||||||| ||| | | | | | | | | ||| | ||| | || | |
Sbjct: 19986 TAATAATATAATAATATAATAATATAATAATATAATAATATAACAATATAATAATATAAT 20045
Query: 321 GTAATAAGAAAACAAATAATATAAAAGTATTAAG 288
|||| || | ||||||||||| | ||| |||
Sbjct: 20046 AATATAATAATATAAATAATATAATATTATCAAG 20079
Score = 104 (28.7 bits), Expect = 0.79, Sum P(2) = 0.55
Identities = 32/46 (69%), Positives = 32/46 (69%), Strand = Minus / Plus
Query: 504 ATAAAAGAATGAAAATAATTTGAACATATAATAATACTTTATTATA 459
||| || | | |||||| | | ||||||||||| || ||||
Sbjct: 19894 ATATAAATAATATAATAATATAATAATATAATAATATAATAATATA 19939
Score = 116 (32.1 bits), Expect = 0.79, Sum P(2) = 0.55
Identities = 68/124 (54%), Positives = 68/124 (54%), Strand = Minus / Plus
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
||||||| | || ||| ||||||||||| || || | ||||| || |
Sbjct: 20522 TAAATTAAATTAAATTAAATTCAAAACAAATAAAATCCAAAACAAATAAAATACAAATTA 20581
Query: 275 GATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGATGTTTCCAAT 216
||| | | || | | ||| ||| | | | || ||| | | |||
Sbjct: 20582 AATTTAAAACAAATAAAACCGAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAAT 20641
Query: 215 TCAA 212
| ||
Sbjct: 20642 TAAA 20645
Score = 97 (26.8 bits), Expect = 6.6, Sum P(2) = 1.0
Identities = 45/77 (58%), Positives = 45/77 (58%), Strand = Minus / Plus
Query: 493 AAAATAATTTGAACATATAATAATACTTTATTATATGACAATTACTCGTAATTCTATCAT 434
| |||||| | | ||||||||||| || |||| | || | | | |
Sbjct: 17930 ATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATAATAATATAA 17989
Query: 433 TAATACTTTAAGTTATT 417
||||| | ||| || |
Sbjct: 17990 TAATAATATAATATAAT 18006
Score = 111 (30.7 bits), Expect = 6.6, Sum P(2) = 1.0
Identities = 47/78 (60%), Positives = 47/78 (60%), Strand = Minus / Plus
Query: 335 TAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATT 276
||||||| | || ||| ||||||||||| || || | ||| |||
Sbjct: 18990 TAAATTAAATTAAATTAAATTCAAAACAAATAAAATTCAAAACGAATAAAAGCCAAAACA 19049
Query: 275 GATTCAGTAAAATTTTTA 258
||| | ||||||| |
Sbjct: 19050 AATTAAAATAAATTTTGA 19067
Score = 80 (22.1 bits), Expect = 1.6, Sum P(3) = 0.79
Identities = 16/16 (100%), Positives = 16/16 (100%), Strand = Minus / Plus
Query: 378 TAATTTAAAATTTTTA 363
||||||||||||||||
Sbjct: 619 TAATTTAAAATTTTTA 634
Score = 89 (24.6 bits), Expect = 1.6, Sum P(3) = 0.79
Identities = 25/34 (73%), Positives = 25/34 (73%), Strand = Minus / Plus
Query: 368 TTTTTACATTTCTAATTATTTTTAAACAATTTAT 335
|||||| | || ||||||||||| | ||| |
Sbjct: 11050 TTTTTAAAAGACTTTTTATTTTTAAATATTTTTT 11083
Score = 126 (34.8 bits), Expect = 1.6, Sum P(3) = 0.79
Identities = 66/117 (56%), Positives = 66/117 (56%), Strand = Minus / Plus
Query: 341 AATTTATAAATTACAAACAAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATAT 282
|||| |||||||||||| | ||||| | || ||| |||| | | | | |
Sbjct: 19146 AATTAATAAATTACAAAAACAAAATAAATCCAAAATTAAATTAAATTAAATTAAATTAAA 19205
Query: 281 TAAATTGATTCAGTAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGAT 225
| || | | | | || |||| ||| ||| | | | || || | ||
Sbjct: 19206 TTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATTAAATCAAAATTAAAT 19262
emb|Z11874|CHEGZ Euglena gracilis Z Chloroplast DNA
Length = 41,017
Plus Strand HSPs:
Score = 81 (22.4 bits), Expect = 0.0064, Sum P(6) = 0.0064
Identities = 21/27 (77%), Positives = 21/27 (77%), Strand = Plus / Plus
Query: 40 TCAATAATTTTGTTAACTTACTTAATT 66
| || | ||||||||||||| | |||
Sbjct: 21516 TAAAAATTTTTGTTAACTTATTGCATT 21542
Score = 87 (24.0 bits), Expect = 0.0064, Sum P(6) = 0.0064
Identities = 35/57 (61%), Positives = 35/57 (61%), Strand = Plus / Plus
Query: 84 TTTTGGCCTGAAAAGATAAACTATTAATTAACGAATAATTTGATTGCAAATTTATGA 140
||||| ||| | | | ||| || | ||||||||||| | ||||| |
Sbjct: 22080 TTTTGTAGAAAAAGTTTTTATTCTTATTTTGAGGATAATTTGATTTATATTTTATTA 22136
Score = 102 (28.2 bits), Expect = 0.0064, Sum P(6) = 0.0064
Identities = 30/42 (71%), Positives = 30/42 (71%), Strand = Plus / Plus
Query: 239 AATTATTTTTTGATTGAATTAAAAATTTTACTGAATCAATTT 280
|||||||||||| || | || ||||| | | | | ||| |
Sbjct: 26077 AATTATTTTTTGTTTAAGTTTTAAATTATTGTAATTAAATAT 26118
Score = 126 (34.8 bits), Expect = 0.0064, Sum P(6) = 0.0064
Identities = 46/72 (63%), Positives = 46/72 (63%), Strand = Plus / Plus
Query: 285 TTTCTTAATACTTTTATATTATTTGTTTTCTTATTACTTGTTTGTAATTTATAAATTGTT 344
||| | ||| | || || ||| || || | ||| ||| | ||||| ||
Sbjct: 31419 TTTTTCCATAGTAGAATTTTTTTTATTAAAGAATAAAAAATTTATAAAATGAAAATTCTT 31478
Query: 345 TAAAAATAATTA 356
||||||||||||
Sbjct: 31479 TAAAAATAATTA 31490
Score = 84 (23.2 bits), Expect = 0.0064, Sum P(6) = 0.0064
Identities = 24/33 (72%), Positives = 24/33 (72%), Strand = Plus / Plus
Query: 417 AATAACTTAAAGTATTAATGATAGAATTACGAG 449
|| | ||| | ||| | |||||||||||||
Sbjct: 38875 AAGATGTTAGGGGATTCCTTATAGAATTACGAG 38907
Score = 83 (22.9 bits), Expect = 0.0064, Sum P(6) = 0.0064
Identities = 27/40 (67%), Positives = 27/40 (67%), Strand = Plus / Plus
Query: 469 TATTATTATATGTTCAAATTATTTTCATTCTTTTATATAA 508
| | |||| | || ||||||||||| || | || ||
Sbjct: 39802 TTTAATTAAAAATTAAAATTATTTTCTTTAGTAGATTAAA 39841
Score = 95 (26.3 bits), Expect = 0.40, Sum P(4) = 0.33
Identities = 67/127 (52%), Positives = 67/127 (52%), Strand = Plus / Plus
Query: 144 GTATAACCATTCGAATATTTTGTTAAAGTAATTGTTTGGATGATATGAAAAAGTGGAAGG 203
|||||| || || | ||| || | ||| ||| | | | || | |
Sbjct: 8140 GTATAATTGTTTAAAGAAAACGTTTAATTTATTTATTGTTATAATTAATAATTTAAACAA 8199
Query: 204 TTTTATTTTTGAATTGGAAACATCTTATATTTTCGAATTATTTTTTGATTGAATTAAAAA 263
|||| | | ||| | | || || | ||||||| || ||||||
Sbjct: 8200 AAAAGTTTTAAGAATTCAAATAATTCTTAAATTTTATGGTAATTTTGATAGATGTAAAAA 8259
Query: 264 TTTTACT 270
||||| |
Sbjct: 8260 TTTTAGT 8266
Score = 101 (27.9 bits), Expect = 0.40, Sum P(4) = 0.33
Identities = 33/49 (67%), Positives = 33/49 (67%), Strand = Plus / Plus
Query: 279 TTAATATTTCTTAATACTTTTATATTATTTGTTTTCTTATTACTTGTTT 327
| | | ||| ||||||||||||||| || | | | ||| || ||
Sbjct: 18417 TAAGTTTTTTATAATACTTTTATATTCTTAATATATATTTTAGTTTATT 18465
Score = 82 (22.7 bits), Expect = 0.40, Sum P(4) = 0.33
Identities = 18/20 (90%), Positives = 18/20 (90%), Strand = Plus / Plus
Query: 336 TAAATTGTTTAAAAATAATT 355
| | ||||||||||||||||
Sbjct: 19225 TTATTTGTTTAAAAATAATT 19244
Score = 110 (30.4 bits), Expect = 0.40, Sum P(4) = 0.33
Identities = 51/88 (57%), Positives = 51/88 (57%), Strand = Plus / Plus
Query: 491 TTTCATTCTTTTATATAAGAAATTATGACTAAATAAAGGAAATAATTGGGTTCACAATGA 550
|| ||| |||| || | || ||| | || || || | | | | ||| | | |
Sbjct: 34324 TTAGATTTATTTAAATTATAATTTACAAATATATTAATAATAAATTGTAGTTAAAATATA 34383
Query: 551 TGATAAAATGCANAAAAAAATTTTTTTT 578
| | | | |||||||||||||
Sbjct: 34384 CTAAATTTTTATAATAAAAATTTTTTTT 34411
Score = 113 (31.2 bits), Expect = 8.6, Sum P(3) = 1.0
Identities = 85/163 (52%), Positives = 85/163 (52%), Strand = Plus / Plus
Query: 157 AATATTTTGTTAAAGTAATTGTTTGGATGATATGAAAAAGTGGAAGGTTTTATTTTTGAA 216
| | || | ||| | |||||| | | || | || ||||||||||||
Sbjct: 21199 ATTGTTGTTTTAGTGAGTTTGTTTTTCTAAATAAAAGATAAATAACTTTTTATTTTTGAT 21258
Query: 217 TTGGAAACATCTTATATTTTCGAATTATTTTTTGATTGAATTAAAAATTTTACTGAATCA 276
| |||| | || ||||||| |||| | | | |||| | |
Sbjct: 21259 GAATTTTAAGTTTATTTGTTTTTATTATTTGTTGAATTTGGTTTATGGTTTAAAAATTTT 21318
Query: 277 ATTTAATATTTCTTAATACTTTTATATTATTTGTTTTCTTATT 319
| || || |||| | | |||||| || || ||
Sbjct: 21319 AATTTATTTTTCATTTCAAAACAGATTTATTTTATTCATTTTT 21361
Score = 84 (23.2 bits), Expect = 8.6, Sum P(3) = 1.0
Identities = 32/51 (62%), Positives = 32/51 (62%), Strand = Plus / Plus
Query: 313 TCTTATTACTTGTTTGTAATTTATAAATTGTTTAAAAATAATTAGAAATGT 363
| |||| || || | |||| ||||||||||| | | | ||| |
Sbjct: 30640 TATTATCGATTTGTTACAGACTATAGTTTGTTTAAAAAAAGCTTGCAATTT 30690
Score = 94 (26.0 bits), Expect = 8.6, Sum P(3) = 1.0
Identities = 26/35 (74%), Positives = 26/35 (74%), Strand = Plus / Plus
Query: 481 TTCAAATTATTTTCATTCTTTTATATAAGAAATTA 515
||||||||||||||| ||| || || || ||
Sbjct: 35893 TTCAAATTATTTTCAAACTTATAATAAAACAAATA 35927
Score = 102 (28.2 bits), Expect = 0.35, Sum P(5) = 0.29
Identities = 30/42 (71%), Positives = 30/42 (71%), Strand = Plus / Plus
Query: 197 TGGAAGGTTTTATTTTTGAATTGGAAACATCTTATATTTTCG 238
|||| ||| | || | ||||||||||| ||| ||| | |
Sbjct: 14211 TGGACAACTTTTTATTGGCATTGGAAACATATTACATTATGG 14252
Score = 97 (26.8 bits), Expect = 0.35, Sum P(5) = 0.29
Identities = 25/32 (78%), Positives = 25/32 (78%), Strand = Plus / Plus
Query: 258 TAAAAATTTTACTGAATCAATTTAATATTTCT 289
||||||||||| | ||| | ||| || ||| |
Sbjct: 18839 TAAAAATTTTAATTAATTACTTTTATTTTTTT 18870
Score = 91 (25.1 bits), Expect = 0.35, Sum P(5) = 0.29
Identities = 39/65 (60%), Positives = 39/65 (60%), Strand = Plus / Plus
Query: 316 TATTACTTGTTTGTAATTTATAAATTGTTTAAAAATAATTAGAAATGTAAAAATTTTAAA 375
| ||| | | | | ||| ||| || || | || | ||||||||||||
Sbjct: 21262 TTTTAAGTTTATTTGTTTTTATTATTTGTTGAATTTGGTTTATGGTTTAAAAATTTTAAT 21321
Query: 376 TTATT 380
|||||
Sbjct: 21322 TTATT 21326
Score = 91 (25.1 bits), Expect = 0.35, Sum P(5) = 0.29
Identities = 27/38 (71%), Positives = 27/38 (71%), Strand = Plus / Plus
Query: 469 TATTATTATATGTTCAAATTATTTTCATTCTTTTATAT 506
| || |||| | || | | || | ||||||||||||
Sbjct: 27159 TCTTTTTATGTTTTTATTATTTTATTATTCTTTTATAT 27196
Score = 83 (22.9 bits), Expect = 0.35, Sum P(5) = 0.29
Identities = 20/25 (80%), Positives = 20/25 (80%), Strand = Plus / Plus
Query: 554 TAAAATGCANAAAAAAATTTTTTTT 578
|||||| || ||||||||||||
Sbjct: 30421 TAAAATAATAAAGAAAATTTTTTTT 30445
Score = 131 (36.2 bits), Expect = 0.0091, Sum P(3) = 0.0090
Identities = 71/127 (55%), Positives = 71/127 (55%), Strand = Plus / Plus
Query: 256 ATTAAAAATTTTACTGAATCAATTTAATATTTCTTAATACTTTTATATTATTTGTTTTCT 315
|||||||||||||| ||| | | || || ||| | |||| |||| | |||
Sbjct: 8004 ATTAAAAATTTTACAAAATTAGAATTATTTTCTCAAATTCCTTTAATTTATCTTTTTGAA 8063
Query: 316 TATTACTTGTTTGTAATTTATAAATTGTTTAAAAATAATTAGAAATGTAAAAATTTTAAA 375
| || || ||||| || || ||| | ||| || || ||
Sbjct: 8064 AGATCTTTAATTTCCTTTTATTGTTTTATTTTTAATTTTGCTTAATAGTAAGATACAAAT 8123
Query: 376 TTATTAA 382
| || ||
Sbjct: 8124 TAATAAA 8130
Score = 93 (25.7 bits), Expect = 0.0091, Sum P(3) = 0.0090
Identities = 37/60 (61%), Positives = 37/60 (61%), Strand = Plus / Plus
Query: 448 AGTAATTGTCATATAATAAAGTATTATTATATGTTCAAATTATTTTCATTCTTTTATATA 507
|| ||| | | | | | | ||||||||||| || ||| || | |||||||
Sbjct: 8897 AGAAATAATGAACTGACATAATATTATTATATCTTATTTTTAAATTTTAATTATTATATA 8956
Score = 108 (29.8 bits), Expect = 0.0091, Sum P(3) = 0.0090
Identities = 33/48 (68%), Positives = 33/48 (68%), Strand = Plus / Plus
Query: 531 AATAATTGGGTTCACAATGATGATAAAATGCANAAAAAAATTTTTTTT 578
||| || || | ||| | | ||||| | ||||||||||||||
Sbjct: 17552 AATTATATTTTTAATAATTAAAAAAAAATTAAATAAAAAATTTTTTTT 17599
Score = 135 (37.3 bits), Expect = 0.82, Sum P(2) = 0.56
Identities = 63/108 (58%), Positives = 63/108 (58%), Strand = Plus / Plus
Query: 278 TTTAATATTTCTTAATACTTTTATATTATTTGTTTTCTTATTACTTGTTTGTAATTTATA 337
| || | || || || ||||||||||| || | |||| || || || ||| |
Sbjct: 18811 TGTATTTTTAGTTTGTAGTTTTATATTATAAAAATTTTAATTAATTACTTTTATTTTTTT 18870
Query: 338 AATTGTTTAAAAATAATTAGAAATGTAAAAATTTTAAATTATTAAGGA 385
| | |||| || | || | ||||| || | ||| ||
Sbjct: 18871 AGTATTTTATAACTTCATAAGTAAAAGGCAATTTAAAGATCTTATTGA 18918
Score = 88 (24.3 bits), Expect = 0.82, Sum P(2) = 0.56
Identities = 24/32 (75%), Positives = 24/32 (75%), Strand = Plus / Plus
Query: 484 AAATTATTTTCATTCTTTTATATAAGAAATTA 515
|||||||||||| | || | | | ||||||
Sbjct: 24558 AAATTATTTTCAATTATTCAAAATAAAAATTA 24589
Score = 117 (32.3 bits), Expect = 2.0, Sum P(3) = 0.86
Identities = 33/45 (73%), Positives = 33/45 (73%), Strand = Plus / Plus
Query: 329 TAATTTATAAATTGTTTAAAAATAATTAGAAATGTAAAAATTTTA 373
||||| |||||| | | ||| | | | ||||||||||||||
Sbjct: 8220 TAATTCTTAAATTTTATGGTAATTTTGATAGATGTAAAAATTTTA 8264
Score = 83 (22.9 bits), Expect = 2.0, Sum P(3) = 0.86
Identities = 27/40 (67%), Positives = 27/40 (67%), Strand = Plus / Plus
Query: 453 TTGTCATATAATAAAGTATTATTATATGTTCAAATTATTT 492
|| | || ||||||||||||| | | || | ||||
Sbjct: 9825 TTTTAATTTAATAAAGTATTAAATTTTTTTGCTAAAATTT 9864
Score = 100 (27.6 bits), Expect = 2.0, Sum P(3) = 0.86
Identities = 28/38 (73%), Positives = 28/38 (73%), Strand = Plus / Plus
Query: 564 AAAAAAATTTTTTTTGCGTTATTTTTAAATTTTGATTT 601
|| | |||||||||||| | | || || ||||| ||
Sbjct: 24211 AATAGAATTTTTTTTGCATGGTATTAAATTTTTGTATT 24248
Minus Strand HSPs:
Score = 128 (35.4 bits), Expect = 9.6, Sum P(2) = 1.0
Identities = 77/142 (54%), Positives = 77/142 (54%), Strand = Minus / Plus
Query: 601 AAATCAAAATTTAAAAATAACGCAAAAAAAATTTTTTTNTGCATTTTATCATCATTGTGA 542
|||| | |||||| ||||| || || || || | | | | || | || |
Sbjct: 34336 AAATTATAATTTACAAATATATTAATAATAAATTGTAGTTAAAATATACTAAATTTTTAT 34395
Query: 541 ACCCAATTATTTCCTTTATTTAGTCATAATTTCTTATATAAAAGAATGAAAATAATTTGA 482
| || ||| || || | | | | | || | | |||||||||
Sbjct: 34396 AATAAAAATTTTTTTTAATATCATGTTTTAAAAATTTTAAACACTTCTATTATAATTTGA 34455
Query: 481 ACATATAATAATACTTTATTAT 460
||||| || | || | || ||
Sbjct: 34456 ACATAATATTAAACCTAATGAT 34477
Score = 81 (22.4 bits), Expect = 9.6, Sum P(2) = 1.0
Identities = 37/63 (58%), Positives = 37/63 (58%), Strand = Minus / Plus
Query: 377 AATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAAGTAA 318
|| | ||||| || | | |||||||||||| | | | || | | || ||
Sbjct: 39260 AAATAAAAATATTATAAAATAAAATTATTTTTAATATAAATCTTAACAAAATTTTAGAAA 39319
Query: 317 TAA 315
||
Sbjct: 39320 GAA 39322
Score = 83 (22.9 bits), Expect = 9.0, Sum P(4) = 1.0
Identities = 24/34 (70%), Positives = 24/34 (70%), Strand = Minus / Plus
Query: 595 AAATTTAAAAATAACGCAAAAAAAATTTTTTTNT 562
|| | ||||| | | ||||||||||||| |
Sbjct: 17567 AATTAAAAAAAAATTAAATAAAAAATTTTTTTTT 17600
Score = 91 (25.1 bits), Expect = 9.0, Sum P(4) = 1.0
Identities = 27/38 (71%), Positives = 27/38 (71%), Strand = Minus / Plus
Query: 495 TGAAAATAATTTGAACATATAATAATACTTTATTATAT 458
|| ||||||||||| | | |||| | ||| ||| |
Sbjct: 29965 TGTTAATAATTTGAAAAATTTATAAAATTTTTATATTT 30002
Score = 100 (27.6 bits), Expect = 9.0, Sum P(4) = 1.0
Identities = 36/56 (64%), Positives = 36/56 (64%), Strand = Minus / Plus
Query: 393 AAATTTCATCCTTAATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATT 338
|||||| | || || || |||| | || | | ||||||||||| | ||
Sbjct: 32334 AAATTTATTGCTATTTATAAGAATATTTAAAAATATTTTATTATTTTTAAGAAGTT 32389
Score = 94 (26.0 bits), Expect = 9.0, Sum P(4) = 1.0
Identities = 26/35 (74%), Positives = 26/35 (74%), Strand = Minus / Plus
Query: 285 ATATTAAATTGATTCAGTAAAATTTTTAATTCAAT 251
| | |||||| || ||||||||||| || |||
Sbjct: 34126 ACAATAAATTACTTTTCTAAAATTTTTAGTTAAAT 34160
Score = 85 (23.5 bits), Expect = 1.9e-09, Sum P(5) = 1.9e-09
Identities = 25/35 (71%), Positives = 25/35 (71%), Strand = Minus / Plus
Query: 479 ATATAATAATACTTTATTATATGACAATTACTCGT 445
||| |||| ||||||||||||| |||| |
Sbjct: 6640 ATAATTTAATCGAAAATTATATGACAATAACTCCT 6674
Score = 100 (27.6 bits), Expect = 1.9e-09, Sum P(5) = 1.9e-09
Identities = 28/38 (73%), Positives = 28/38 (73%), Strand = Minus / Plus
Query: 445 TAATTCTATCATTAATACTTTAAGTTATTGCTTTTTTT 408
| | | ||| ||||||||||| | ||| || |||||
Sbjct: 12881 TTAATTTATAATTAATACTTTTATAAATTACTATTTTT 12918
Score = 128 (35.4 bits), Expect = 1.9e-09, Sum P(5) = 1.9e-09
Identities = 40/58 (68%), Positives = 40/58 (68%), Strand = Minus / Plus
Query: 379 ATAATTTAAAATTTTTACATTTCTAATTATTTTTAAACAATTTATAAATTACAAACAA 322
| | ||||||||||||| | | || ||||||| |||| | || | | ||| ||
Sbjct: 31188 AAATTTTAAAATTTTTATAAATATATTTATTTTCAAACTAGATAATTAATCGAAAGAA 31245
Score = 116 (32.1 bits), Expect = 1.9e-09, Sum P(5) = 1.9e-09
Identities = 36/52 (69%), Positives = 36/52 (69%), Strand = Minus / Plus
Query: 323 AAGTAATAAGAAAACAAATAATATAAAAGTATTAAGAAATATTAAATTGATT 272
|| | |||| ||||||||||| ||| || | | | |||| | |||||
Sbjct: 35908 AACTTATAATAAAACAAATAAAATACAATTTTAATTGAATAGCCATATGATT 35959
Score = 150 (41.4 bits), Expect = 1.9e-09, Sum P(5) = 1.9e-09
Identities = 62/102 (60%), Positives = 62/102 (60%), Strand = Minus / Plus
Query: 268 TAAAATTTTTAATTCAATCAAAAAATAATTCGAAAATATAAGATGTTTCCAATTCAAAAA 209
|||||||||||||| | | ||||||||| | ||||| | | | || | | |
Sbjct: 37536 TAAAATTTTTAATTAATTAAAAAAATAAACCCAAAATTTGATAACATTTGCAATTTCGTA 37595
Query: 208 TAAAACCTTCCACTTTTTCATATCATCCAAACAATTACTTTA 167
| || | ||||| | || | | ||| || | || |
Sbjct: 37596 AACAAAATATGACTTTATAATTTGTTTAAAAGAAATTATTCA 37637
Score = 138 (38.1 bits), Expect = 2.0, Sum P(2) = 0.86
Identities = 54/87 (62%), Positives = 54/87 (62%), Strand = Minus / Plus
Query: 432 AATACTTTAAGTTATTGCTTTTTTTTCCATGTAATTGCTAAATTTCATCCTTAATAATTT 373
|||| | || |||| || ||||| | | | | | ||| | | ||| ||||
Sbjct: 4603 AATATTAAAATATATTCTTTATTTTTACGTTTTAATCGTAAGTAATTTTCTTCGCTATTT 4662
Query: 372 AAAATTTTTACATTTCTAATTATTTTT 346
||||||||| | || || |||||
Sbjct: 4663 AAAATTTTTGATATATTATTTCTTTTT 4689
Score = 80 (22.1 bits), Expect = 2.0, Sum P(2) = 0.86
Identities = 28/43 (65%), Positives = 28/43 (65%), Strand = Minus / Plus
Query: 141 TTCATAAATTTGCAATCAAATTATTCGTTAATTAATAGTTTAT 99
|| ||| ||| ||| ||||||||||| | | | |||
Sbjct: 19317 TTACTAATTTTTTAATATGATTATTCGTTATTACAAACCATAT 19359
Parameters:
V=5
Lambda K H
0.192 0.173 0.357
E S T X
10.0 122 0 73
Database: Non-redundant GenBank+EMBL+DDBJ+PDB sequences
Posted date: Mar 12, 1998 8:57 AM
# of letters in database: 650,005,970
# of sequences in database: 330,715
Number of Hits to DB: 589218
Number of Sequences: 330715
Number of extensions: 589218
Number of successful extensions: 59827
Number of sequences better than 10: 1724