Brugia malayi genome project

SLATKO LAB BAC END SEQUENCING

 The ends of a number of BACs have been sequenced by the Slatko lab, New England BioLabs. These sequences are analysed and tabulated below. Other GSS (genome survey sequence) data  are available from the GSS page.

clone number 

Primer

 Bacterial 

 Filarial 

 blastx vs nr 

blastn vs dbest

blastn vs nr 

AT Content

BAC-I20-8

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

67%

BAC-K2-11

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

65%

BAC-K4-7

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

64%

BAC-A11-11

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

60%

BAC-B9-11

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

69%

BAC-N2-11

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

58%

BAC-H13-7

T7

Novel

blastx

blastn vs dbest

blastn vs nr 

64%

BAC-M19-8

T7

RAD50 homologue
Caenorhabditis elegans

blastx

blastn vs dbest

blastn vs nr 

62%