David Guiliano's Genes-of-Interest Operons
This table describes a number of C. elegans operons for which we have Brugia malayi EST homologues. David Guiliano is actively searching for these conserved operons in Brugia.
|
protein |
cosmid |
coordinates |
operonic +/- |
gene 1 |
gene 2 |
gene 3 |
gene 4 |
other comments |
|
gp15/400 |
- |
|
|
|
|
|
|
there are Ce ESTs homologs |
|
Bm20 |
F02A9 |
3[-25.10,7.00] |
- |
|
|
|
|
other Ce cosmid have homologs F15B9.1,W02A2.e,F15B9.2 |
|
|
F02A9 |
3[-25.10,7.00] |
- |
|
|
|
|
F02A9 .2 and .3 (Bm20 homologs) are right next to each other on opp. strands |
|
alt-1 |
- |
|
|
|
|
|
|
|
|
alt-2 |
- |
|
|
|
|
|
|
|
|
alt-3 |
- |
|
|
|
|
|
|
|
|
sod-1 |
SODC- |
|
|
|
|
|
|
|
|
sod-2 |
- |
|
|
|
|
|
|
|
|
cpi-1 |
- |
|
|
|
|
|
|
there are Ce ESTs homologs |
|
cpi-2 |
- |
|
|
|
|
|
|
there are Ce ESTs homologs |
|
efa-1 |
R03G5 |
X[-200.00,24.50] |
|
|
|
|
|
R03G5.5 is GPX-4 |
|
tub-1 |
C54C6 |
3[-25.10,7.00] |
|
|
|
|
|
same cosmid as L37 |
|
ncs-1 |
|
|
|
|
|
|
|
|
|
ncs-2 |
|
|
|
|
|
|
|
|
|
gpx-1 |
C11E4 |
X[-200.00,24.50] |
|
|
|
|
|
C11E4.6,.7 is in an operon |
|
slt-1 |
- |
|
|
|
|
|
|
shows excellent homology to a section of T22G5.3 |
|
cdd-1 |
F49E8 |
4[30.00,17.89] |
+ |
F49E8.4 cdd |
F49E8.5 aminopeptidase |
|
|
|
|
|
C47D2 |
X[-200.00,24.50] |
- |
|
|
|
|
|
|
tph-1 |
|
|
|
|
|
|
|
|
|
MIF-1 |
C25E4 |
V [25.00,18.09] |
+ |
C25E4.3 |
C25E4.2 |
|
|
C25E4.4 proteosome 26S alpha RRAMCA1570SK |
|
tpx-1 |
R07E5 |
3[-25.10,7.00] |
+ |
R07E5.3 nuclear protein SNF5 SWAMCA403SK |
R07E5.14 HNRNP A2 SW3ICA1252SK |
R07E5.2 TPX-1 |
R07E5.1 NH |
SW3ICA1970 matches R07E5.13 R07E5.7,.12,.10,.11 are in an operon SW3ICA2451SK matches R07E5.12 SW3ICA1252SK matches R07E5.14 |
|
tpx-2 |
F09E5 |
2[-18.32,24.00] |
+ |
F09E5.3 deoxyriboaldolase |
F09E5.2 TPX-2 |
F09E5.1 protein kinase C |
|
|