NEMBASE Annotation search page

Retrieve a specific cluster
Enter either its ID (e.g. ASC00088), the ID of its protein translation (e.g. ASP00088 or ASP00088_1), the accession number of one of its constituent sequences (e.g. AW165759) or a clone name (e.g. As_nc_06H11).

or use the form below (see documentation) to identify nematode sequence clusters which match your search criteria.

to perform search to reset form

Organism Search against blast output Ancylostoma caninumAscaris lumbricoidesAscaris suumAncylostoma ceylanicumBrugia malayiCaenorhabditis briggsaeCaenorhabditis elegansDirofilaria immitisGlobodera pallidaGlobodera rostochiensisHaemonchus contortusHeterodera glycinesHeterodera schachtiiLitomosoides sigmodontisMeloidogyne arenariaMeloidogyne chitwoodiMeloidogyne haplaMeloidogyne incognitaMeloidogyne javanicaMeloidogyne paranaensisNecator americanusNippostrongylus brasiliensisOstertagia ostertagiOnchocerca volvulusPratylenchus penetransPristionchus pacificusParastrongyloides trichosuriPratylenchus vulnusRadopholus similisStrongyloides rattiStrongyloides stercoralisToxocara canisTeladorsagia circumcinctaTrichuris murisTrichinella spiralisTrichuris vulpisWuchereria bancroftiXiphinema indexZeldia punctata Text Minimum e score To view all clusters for an organism just leave the text box blank To select more than one organism click while pressing the CTRL and ALT key

View results as a list ordered by : abundance blast score View Detailed Library Information (Warning may take some time)

Or via SimiTri (select databases from below) Zeldia punctata Ascaris suum C. elegans Ancyclostoma canium Ancyclostoma ceylanicum Ascaris lumbricoides Brugia malayi Dirofilaria immitis Globodera pallida Globodera rostochiensis Haemonchus contortus Heterodera glycines Meloidogyne arenaria Meloidogyne chitwoodi Meloidogyne hapla Meloidogyne incognita Meloidogyne javanica Necator americanus Nippostrongylus brasiliensis Ostertagia ostertagi Onchocerca volvulus Pratylenchus penetrans Pristionchus pacificus Parastrongyloides penetrans Strongyloides ratti Strongyloides stercoralis Toxocara canis Trichinella spiralis Teladorsagia circumcincta Trichuris muris Trichuris vulpis ....Node1 Zeldia punctata Ascaris suum C. elegans Ancyclostoma canium Ancyclostoma ceylanicum Ascaris lumbricoides Brugia malayi Dirofilaria immitis Globodera pallida Globodera rostochiensis Haemonchus contortus Heterodera glycines Meloidogyne arenaria Meloidogyne chitwoodi Meloidogyne hapla Meloidogyne incognita Meloidogyne javanica Necator americanus Nippostrongylus brasiliensis Ostertagia ostertagi Onchocerca volvulus Pratylenchus penetrans Pristionchus pacificus Parastrongyloides penetrans Strongyloides ratti Strongyloides stercoralis Toxocara canis Trichinella spiralis Teladorsagia circumcincta Trichuris muris Trichuris vulpis ....Node2 Zeldia punctata Ascaris suum C. elegans Ancyclostoma canium Ancyclostoma ceylanicum Ascaris lumbricoides Brugia malayi Dirofilaria immitis Globodera pallida Globodera rostochiensis Haemonchus contortus Heterodera glycines Meloidogyne arenaria Meloidogyne chitwoodi Meloidogyne hapla Meloidogyne incognita Meloidogyne javanica Necator americanus Nippostrongylus brasiliensis Ostertagia ostertagi Onchocerca volvulus Pratylenchus penetrans Pristionchus pacificus Parastrongyloides penetrans Strongyloides ratti Strongyloides stercoralis Toxocara canis Trichinella spiralis Teladorsagia circumcincta Trichuris muris Trichuris vulpis ....Node3

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