From NematodeGenomes
Species: Brugia malayi
Parent taxon: Brugia
NCBI Taxonomy Page: NCBI txid:6279
Description: lymphatic filarial parasite of humans
BClade: Bclade III
Interested people: Mark Blaxter, Elodie Ghedin
Genome size: 90 Mb
Genome size source: nuclear staining, single copy gene hybridisation
Genome AT%: 72 %
Genome AT% source: genome sequence
Genome Publications: PMID:17885136 PMID:15780005 PMID:15099548 PMID:10731564
Transcriptome Publications: PMID:16824625 PMID:15992941 PMID:11925998 PMID:10593179 PMID:8784774
Strain Sequencing Status
This section has sequencing information about strains of this species.
To add information about sequencing strains of the species Brugia malayi, use the following form with the full strain name, e.g., Brugia malayi Strain not specified:
To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:
Strain Genome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Brugia malayi TRS | published | Elodie Ghedin | NIH | J Craig Venter Institute | shotgun sequenced from small insert libraries; scaffolded using BAC library end sequences | http://www.wormbase.org/db/gb2/gbrowse/b_malayi ftp://ftp.wormbase.org/pub/wormbase/species/b_malayi/ |
1X |
Strain Transcriptome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Brugia malayi TRS | complete | Wellcome Trust | Blaxter lab University of Edinburgh Mitreva lab WUSTL |
NEMBASE4: clusterid BMC, updated 08/2008, 25 libraries, 9,961 clusters, 25,844 ESTs | http://www.nematodes.org/nembase4 | 1X |
Phylogenetic context
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