From NematodeGenomes
Species: Caenorhabditis elegans
Parent taxon: Caenorhabditis
NCBI Taxonomy Page: NCBI txid:6239
Description: free-living bacteriovore
BClade: Bclade V
Interested people: John Sulston, Sydney Brenner
Genome size: 100.2 Mb
Genome size source: Sulston and Brenner PMID: 4858229
Genome AT%: 64 %
Genome AT% source: genome sequence
Genome Publications: PMID:1538779 PMID:9851916
Transcriptome Publications: PMID:1302005 PMID:1302004 PMID:8650370
Strain Sequencing Status
This section has sequencing information about strains of this species.
To add information about sequencing strains of the species Caenorhabditis elegans, use the following form with the full strain name, e.g., Caenorhabditis elegans Strain not specified:
To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:
Strain Genome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Caenorhabditis elegans N2 | published | Wellcome Trust NIH |
Wellcome Trust Sanger Institute The Genome Institute at Washington University |
The genome was sequenced from a combination of mapped cosmids and fosmids, mapped YACs and a few long-range PCR products, using Sanger dideoxy technology.The genome is essentially complete (telomere to telomere). | http://www.wormbase.org/db/gb2/gbrowse/c_elegans/ ftp://ftp.wormbase.org/pub/wormbase/species/c_elegans/ |
1X |
Strain Transcriptome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Caenorhabditis elegans N2 | published | http://www.wormbase.org/ | 1X |
Phylogenetic context
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