From NematodeGenomes
Species: Dirofilaria immitis
Parent taxon: Dirofilaria
NCBI Taxonomy Page: NCBI txid:6287
Description: filarial parasite of canids
BClade: Bclade III
Interested people: Mark Blaxter, Barton Slatko, Claudio Bandi, Jeremy Foster
Genome size: 90 Mb
Genome size source: comparison to Brugia malayi
Genome AT%:
Genome AT% source:
Genome Publications:
Transcriptome Publications:
Strain Sequencing Status
This section has sequencing information about strains of this species.
To add information about sequencing strains of the species Dirofilaria immitis, use the following form with the full strain name, e.g., Dirofilaria immitis Strain not specified:
To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:
Strain Genome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Dirofilaria immitis Edinburgh/TRS/Basel | in annotation | Mark Blaxter | BlaxterLab University of Edinburgh Maser Lab Basel |
The GenePool Fasteris |
10/2010: In collaboration with Adrian Wolstenholme, we are sequencing the genome of the TRS 'strain' of D. immitis. 06/2011 Ongoing: The genome is now being sequenced in collaboration with Pascal Maser, Basel, and Daniel Nielsson, Stockholm. They have added sequence data from an Italian isolate. | http://nematodes.org/downloads/959nematodegenomes/blast | 0 |
Strain Transcriptome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Dirofilaria immitis Edinburgh/TRS/Basel | complete | Mark Blaxter | GenePool | NEMBASE4: clusterid DIC, updated 08/2008, 2 libraries, 1,788 clusters, 3,762 ESTs 2011 Illumina RNASeq Libraries from adult male and adult female to generate transcriptome profile | 0 |
Phylogenetic context
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