From NematodeGenomes
Species: Howardula aoronymphium
Parent taxon: Howardula
NCBI Taxonomy Page: NCBI txid:209930
Description: parasite of Drosophilids with very interesting lifecycle
BClade: Bclade IV
Interested people: Mark Blaxter, Sujai Kumar, Georgios Koutsovoulos, John Jaenike
Genome size:
Genome size source:
Genome AT%:
Genome AT% source:
Genome Publications:
Transcriptome Publications:
Strain Sequencing Status
This section has sequencing information about strains of this species.
To add information about sequencing strains of the species Howardula aoronymphium, use the following form with the full strain name, e.g., Howardula aoronymphium Strain not specified:
To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:
Strain Genome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Howardula aoronymphium Jaenike | ongoing | Mark Blaxter | BlaxterLab University of Edinburgh JaenickeLab |
The GenePool | 06/2011 Ongoing: Bulk Illumina sequencing has been performed, and is unergoing assembly. There is major "contamination" with host (Drosophila putrida) DNA and so we are also draft sequencing D. putrida to be able to negatively select the fly DNA from the nematode. | http://nematodes.org/downloads/959nematodegenomes/blast | 0 |
Strain Transcriptome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Howardula aoronymphium Jaenike | none | 0 |
Phylogenetic context
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This species is an interesting parasite of Drosophilids world wide. The adults live in flies that feed on mushrooms, and the larvae infest the mushrooms. It has been studied extensively by John Jaenike, and this project is based on genomic DNA supplied by him.