From NematodeGenomes
Species: Meloidogyne incognita
Parent taxon: Meloidogyne incognita group
NCBI Taxonomy Page: NCBI txid:6306
Description: tylenchine plant parasite: root knot nematode
BClade: Bclade IV
Interested people: Pierre Abad, Etienne G.J. Danchin
Genome size: 86 Mb
Genome size source: genome sequence
Genome AT%:
Genome AT% source:
Genome Publications: PMID:18660804 PMID:19400640
Transcriptome Publications: PMID:12702207
Strain Sequencing Status
This section has sequencing information about strains of this species.
To add information about sequencing strains of the species Meloidogyne incognita, use the following form with the full strain name, e.g., Meloidogyne incognita Strain not specified:
To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:
Strain Genome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Meloidogyne incognita Morelos | published | Pierre Abad Etienne G.J. Danchin |
INRA | Genoscope | "We obtained paired-end sequences from plasmid and BAC libraries with the Sanger dideoxynucleotide technology on ABI3730xl DNA analyzers. The 1,000,873 individual reads were assembled in 2,817 supercontigs using Arachne" | http://www.inra.fr/meloidogyne_incognita http://www.wormbase.org/db/gb2/gbrowse/m_incognita/ ftp://ftp.wormbase.org/pub/wormbase/species/m_incognita/ |
1X |
Strain Transcriptome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Meloidogyne incognita Morelos | published | Etienne G.J. Danchin Pierre Abad |
Mitreva lab WUSTL | Genoscope The Genome Institute at Washington University |
NEMBASE4: clusterid MIC, updated 08/2008, 11 libraries, 6,227 clusters, 19,806 ESTs | http://www.nematodes.org/nembase4 http://www.nematode.net |
1X |
Phylogenetic context
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