From NematodeGenomes
Species: Onchocerca ochengi
Parent taxon: Onchocerca
NCBI Taxonomy Page: NCBI txid:42157
Description:
BClade: Bclade III
Interested people: Mark Blaxter, Benjamin Makepeace, Gaganjot Kaur, Alistair Darby, Sara Lustigman
Genome size: 90 Mb
Genome size source: comparison to Brugia malayi
Genome AT%:
Genome AT% source:
Genome Publications:
Transcriptome Publications:
Strain Sequencing Status
This section has sequencing information about strains of this species.
To add information about sequencing strains of the species Onchocerca ochengi, use the following form with the full strain name, e.g., Onchocerca ochengi Strain not specified:
To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:
Strain Genome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Onchocerca ochengi Cameroon/wild | in annotation | Mark Blaxter | European Commission (SCOOT and E-PIAF programmes) | BlaxterLab University of Edinburgh | The GenePool Wellcome Trust Sanger Institute |
06/2011 Ongoing: Bulk genome data have been collected; assembly and annotation are underway; Wolbachia completeed by Benjamin Makepeace and Alistair Darby of Liverpool University. | http://nematodes.org/downloads/959nematodegenomes/blast | 0 |
Strain Transcriptome Sequencing:
| Strain | Status | Contact | Funder | Institution | Sequencing Centre | Plan/Status | URL | Reference Strain |
|---|---|---|---|---|---|---|---|---|
| Onchocerca ochengi Cameroon/wild | none | NEMBASE4: clusterid OCC, updated 08/2008, 1 library, 37 clusters, 59 ESTs | 0 |
Phylogenetic context
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