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Browse wiki
From NematodeGenomes
| Modification dateThis property is a special property in this wiki.
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1 August 2010 14:19:01 +
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| Strain bclade
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Bclade IV +
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| Strain genome contact
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David Bird +
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| Strain genome institution
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Center for the Biology of Nematode Parasitism +
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| Strain genome plan
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Multiple-sized insert libraries were const … Multiple-sized insert libraries were constructed from DNA from the inbred line VW9,
and whole-genome shotgun sequencing reactions were analyzed by 1.04 million reads yielding 587 million base pairs of sequence.
By using Arachne, these were assembled into 1,523 scaffolds, resulting in 10.4x coverage of the ~54-Mb genome and spanning 99% of the VW9 genome genome and spanning 99% of the VW9 genome
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| Strain genome seqcentre
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Genomic Sciences Laboratory NCSU +,
DOE Joint Genome Institute +
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| Strain genome status
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published +
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| Strain genome url
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http://www.hapla.org/ +,
http://www.wormbase.org/db/gb2/gbrowse/m_hapla/ +,
ftp://ftp.wormbase.org/pub/wormbase/species/m_hapla/ +
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| Strain is reference
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true +
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| Strain mitochondrion status
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published +
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| Strain symbiont status
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none +
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| Strain transcriptome contact
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David Bird +
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| Strain transcriptome plan
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NEMBASE4: clusterid MHC, updated 08/2008, 6 libraries, 7,021 clusters, 23,992 ESTs
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| Strain transcriptome status
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complete +
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| Strain transcriptome url
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http://www.nematodes.org/nembase4 +,
http://www.nematode.net +
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| Taxon parent
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Meloidogyne hapla +
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| Categories |
Strain
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