Species in sequencing

From NematodeGenomes

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Genomes in sequencing
Transcriptomes in sequencing

Strain	Species	Strain genome status	Strain genome contact	Strain genome seqcentre	Strain genome url
Acrobeloides nanus ES501	Acrobeloides nanus	ongoing	Itai Yanai	Yanai Lab
Angiostrongylus cantonensis Not specified	Angiostrongylus cantonensis	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute
Anguillicoloides crassus Karlsruhe	Anguillicoloides crassus	ongoing	Mark Blaxter Emanuel Heitlinger	The GenePool
Ascaris lumbricoides Not specified	Ascaris lumbricoides	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute
Ascaris suum Davis	Ascaris suum	ongoing	Richard Davis	The Genome Institute at Washington University	http://www.ncbi.nlm.nih.gov/nuccore/320321071
Ascaris suum WTSI	Ascaris suum	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute	http://www.sanger.ac.uk/resources/downloads/helminths/ascaris-suum.html
Brugia pahangi Not specified	Brugia pahangi	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute
Bursaphelenchus mucronatus Not specified	Bursaphelenchus mucronatus	in annotation
Bursaphelenchus xylophilus Not specified	Bursaphelenchus xylophilus	in annotation		BGI
Caenorhabditis brenneri PB2801	Caenorhabditis brenneri	complete	Makedonka Mitreva Erich Schwarz	The Genome Institute at Washington University	http://www.wormbase.org/db/gb2/gbrowse/c_brenneri/ ftp://ftp.wormbase.org/pub/wormbase/species/c_brenneri/
Caenorhabditis briggsae HK105	Caenorhabditis briggsae	ongoing	Dee Denver	Oregon State University CGRB
Caenorhabditis japonica DF5081	Caenorhabditis japonica	complete	Makedonka Mitreva Erich Schwarz	The Genome Institute at Washington University	http://www.wormbase.org/db/gb2/gbrowse/c_japonica/ ftp://ftp.wormbase.org/pub/wormbase/species/c_japonica/
Caenorhabditis remanei PB4641	Caenorhabditis remanei	complete	Makedonka Mitreva Erich Schwarz	The Genome Institute at Washington University	http://www.wormbase.org/db/gb2/gbrowse/c_remanei/ ftp://ftp.wormbase.org/pub/wormbase/species/c_remanei/
Caenorhabditis sp. 11 JU1373	Caenorhabditis sp. 11	ongoing	Makedonka Mitreva	The Genome Institute at Washington University	http://genome.wustl.edu/pub/organism/Invertebrates/Caenorhabditis_sp11_JU1373/
Caenorhabditis sp. 5 DRD-2008 JU800	Caenorhabditis sp. 5 DRD-2008	ongoing	Mark Blaxter	The GenePool	http://nematodes.org/downloads/959nematodegenomes/blast
Caenorhabditis sp. 7 JU1286	Caenorhabditis sp. 7	ongoing	Makedonka Mitreva	The Genome Institute at Washington University	ftp://ftp.wormbase.org/pub/wormbase/species/c_sp7/
Caenorhabditis sp. 9 AC-2009 JU1422	Caenorhabditis sp. 9 AC-2009	in annotation	Makedonka Mitreva	The Genome Institute at Washington University	ftp://ftp.wormbase.org/pub/wormbase/species/c_sp9/
Cyathostomum catinatum Not specified	Cyathostomum catinatum	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute
Cylicostephanus goldi Not Specified	Cylicostephanus goldi	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute
Dictyocaulus viviparus Not specified	Dictyocaulus viviparus	ongoing	Makedonka Mitreva	The Genome Institute at Washington University	http://www.nematode.net/
Dirofilaria immitis Edinburgh/TRS/Basel	Dirofilaria immitis	in annotation	Mark Blaxter	The GenePool Fasteris	http://nematodes.org/downloads/959nematodegenomes/blast
Dracunculus medinensis Not specified	Dracunculus medinensis	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute CDC
Enoplus brevis Sylt/wild	Enoplus brevis	ongoing	Mark Blaxter	The GenePool
Globodera pallida Not specified	Globodera pallida	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute	http://www.sanger.ac.uk/sequencing/Globodera/pallida/
Globodera rostochiensis R0-19	Globodera rostochiensis	ongoing	Michael Rott
Haemonchus contortus Moredun	Haemonchus contortus	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute	http://www.sanger.ac.uk/Projects/H_contortus/ ftp://ftp.wormbase.org/pub/wormbase/species/h_contortus/ http://www.wormbase.org
Haemonchus placei Not Specified	Haemonchus placei	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute
Heligmosomoides polygyrus lab strain	Heligmosomoides polygyrus	ongoing	Mark Blaxter Rick Maizels	The GenePool
Heterorhabditis bacteriophora M31e	Heterorhabditis bacteriophora	in annotation	Paul Sternberg	The Genome Institute at Washington University	http://genome.wustl.edu/genome.cgi?GENOME=Heterorhabditis%20%20bacteriophora
Howardula aoronymphium Jaenike	Howardula aoronymphium	ongoing	Mark Blaxter	The GenePool	http://nematodes.org/downloads/959nematodegenomes/blast
Laxus oneistus Bulgheresi/wild	Laxus oneistus	ongoing	Mark Blaxter	The GenePool
Litomosoides sigmodontis lab strain established from Cameroon by Odile Bain	Litomosoides sigmodontis	ongoing	Mark Blaxter	The GenePool	http://nematodes.org/downloads/959nematodegenomes/blast
Loa loa Nutman/Broad	Loa loa	in annotation	Thomas Nutman	The Broad Institute of MIT and Harvard	http://www.broadinstitute.org/annotation/genome/filarial_worms/MultiHome.html
Meloidogyne arenaria Not specified	Meloidogyne arenaria	ongoing	Etienne G.J. Danchin Pierre Abad	Genoscope
Meloidogyne floridensis Not specified	Meloidogyne floridensis	in annotation		The GenePool
Meloidogyne javanica Not specified	Meloidogyne javanica	ongoing	Etienne G.J. Danchin Pierre Abad	Genoscope
Nippostrongylus brasiliensis lab strain	Nippostrongylus brasiliensis	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute	http://www.sanger.ac.uk/sequencing/Nippostrongylus/brasiliensis/
Onchocerca ochengi Cameroon/wild	Onchocerca ochengi	in annotation	Mark Blaxter	The GenePool Wellcome Trust Sanger Institute	http://nematodes.org/downloads/959nematodegenomes/blast
Onchocerca volvulus Nutman/Broad	Onchocerca volvulus	ongoing	Thomas Nutman	The Broad Institute of MIT and Harvard	http://www.broadinstitute.org/annotation/genome/filarial_worms/MultiHome.html
Onchocerca volvulus WTSI/wild Liberia	Onchocerca volvulus	ongoing	Matt Berriman Nancy Holroyd	Wellcome Trust Sanger Institute	http://www.sanger.ac.uk/resources/downloads/helminths/onchocerca-volvulus.html
Oscheius tipulae CEW1	Oscheius tipulae	ongoing	Mark Blaxter	The GenePool	http://nematodes.org/downloads/959nematodegenomes/blast
Panagrellus redivivus (Sternberg lab)	Panagrellus redivivus	ongoing	Paul Sternberg	Caltech Jacobs Genome Center
Panagrolaimus JU765 Not specified	Panagrolaimus spec. strain JU765	ongoing	Philipp Schiffer	Macrogen CCG
Panagrolaimus sp. JB051 ABC123	Panagrolaimus spec. strain JB051	ongoing	Philipp Schiffer	CCG
Panagrolaimus sp. PS1159	Panagrolaimus spec. strain PS1159 Panagrolaimus	ongoing	Philipp Schiffer	GenePool
Panagrolaimus spec. strain DL0137	Panagrolaimus sp. DL0137	ongoing	Philipp Schiffer	CCG
Panagrolaimus spec. strain PS1162	Panagrolaimus sp. PS1162	ongoing	Philipp Schiffer	CCG
Panagrolaimus spec. strain PS1579	Panagrolaimus sp. PS1579	ongoing	Philipp Schiffer	CCG
Panagrolaimus species PS1159	Panagrolaimus PS1159	ongoing	Philipp Schiffer	The GenePool
Panagrolaimus superbus DF5050	Panagrolaimus superbus	ongoing	Mark Blaxter Ann Burnell Georgina O'Mahony Zamora	The GenePool
… further results