Species: Strongyloides ratti

Parent taxon: Strongyloides

NCBI Taxonomy Page: NCBI txid:34506

Description:

BClade: Bclade IV

Interested people:

Genome size: 50 Mb

Genome size source: from assembly data

Genome AT%: 73 %

Genome AT% source: genome sequence

Genome Publications:

Transcriptome Publications:

Strain Sequencing Status

This section has sequencing information about strains of this species.

To add information about sequencing strains of the species Strongyloides ratti, use the following form with the full strain name, e.g., Strongyloides ratti Strain not specified:

To update information about the sequencing status of the strains, click on the strain pages below, and edit those pages:

Strain Genome Sequencing:

Strain	Status	Contact	Funder	Institution	Sequencing Centre	Plan/Status	URL	Reference Strain
Strongyloides ratti ED321	in annotation	Matt Berriman Nancy Holroyd	Wellcome Trust	University of Bristol Wellcome Trust Sanger Institute	Wellcome Trust Sanger Institute	06/2011 Ongoing: Bulk sequencing is complete and preliminary assembly performed (56 Mb in 50 scaffolds, with 47 Mb assigned to chromosome). Genome is now in finishing and will proceed to annotation soon.	http://www.sanger.ac.uk/resources/downloads/helminths/strongyloides-ratti.html	1X

Strain Transcriptome Sequencing:

Strain	Status	Contact	Funder	Institution	Sequencing Centre	Plan/Status	URL	Reference Strain
Strongyloides ratti ED321	none					NEMBASE4: clusterid SRC, updated 08/2008, 12 libraries, 5,152 clusters, 26,400 ESTs		1X

Phylogenetic context