Search NEMBASE4 for sequences with specified annotations

Use the form below to set key words and parameters for searching the available sequence annotations in nembase4.
First select the annotation type; then enter the parameters in the pop-in fields; then (optionally) select a subset of species to search. Finally click "Search" (at the bottom of the page).
To perform another search, please reaload this page from the menu to the left, to clear any fields you may have entered previously.

Annotation Type Detailed parameters for search (pop-in) BLAST hit description search text minimum E-value (e.g. 1e-10) minimum Score (e.g. 100) Order results by sequence abundance BLAST e-value Report all hits 1st hit only GOtcha description Description [e.g. "actin binding"] GO id [e.g.GO:0019207] search text minimum E-value (e.g. 1e-10) KEGG Description [e.g. "Apoptosis"] pathway number [e.g. "04210"] KEGG orthology number [e.g. "K04739"] search text Enzyme Commission description [e.g. "cGMP-dependentproteinkinase"] number [e.g. "2.7.11.12"] search text Domain Interpro description [e.g. "actin-binding"] Domain ID [e.g. "IPR000595" or "PF00027"] search text Tip if you want actin but not interacting use spaces in the Text field By default all species are selected, to manually select by clade or species click here   Species to search   Use the checkboxes to select a taxonomic group of species (based on the taxonomy of Blaxter and DeLey),   or (on the list below) your own selection of species. All Species | | | | |     CladeI     |     Rhabditina     | CladeIII | CladeIV | CladeV |     Trichinellida     |     Ascarididomorpha     |     Spiruromorpha     |     Strongyloidoidea     |     Tylenchomorpha     |     Strongylomorpha     | Meloidogyne     Xiphinema index         Trichuris muris         Trichinella spiralis         Trichuris vulpis         Anisakis simplex         Ascaris lumbricoides         Ascaris suum         Toxocara canis         Toxascaris leonina         Brugia malayi         Brugia pahangi         Dirofilaria immitis         Loa loa         Litomosoides sigmodontis         Onchocerca ochengi         Onchocerca flexuosa         Onchocerca volvulus         Wuchereria bancrofti         Dictyocaulus viviparus         Heterodera schachtii         Trichostrongylus vitrinus         Parastrongyloides trichosuri         Strongyloides ratti         Strongyloides stercoralis         Bursaphelenchus mucronatus         Bursaphelenchus xylophilus         Ditylenchus africanus         Globodera mexicana         Globodera pallida         Globodera rostochiensis         Heterodera glycines         Pratylenchus penetrans         Pratylenchus vulnus         Radopholus similis         Zeldia punctata         Meloidogyne arenaria         Meloidogyne chitwoodi         Meloidogyne hapla         Meloidogyne incognita         Meloidogyne javanica         Meloidogyne paranaensis         Panagrolaimus superbus         Steinernema carpocapsae         Steinernema feltiae         Oesophagostomum dentatum         Parelaphostrongylus tenuis         Pristionchus pacificus         Angiostrongylus cantonensis         Ancylostoma braziliense          Ancylostoma caninum         Ancylostoma ceylanicum         Haemonchus contortus         Necator americanus         Nippostrongylus brasiliensis         Ostertagia ostertagi         Teladorsagia circumcincta         Caenorhabditis brenneri         Caenorhabditis elegans         Caenorhabditis briggsae          Caenorhabditis japonica         Caenorhabditis remanei         Caenorhabditis sp. 5 AC-2008         Heterorhabditis bacteriophora