BaNG - Blaxter Nematode and Neglected Genomics
NEMBASE4
 Nematode Transcriptome Analyses
University of Edinburgh
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Current status of NEMBASE4

NEMBASE4 contains data for 62 Species, from 324 libraries, 237,181 clusters and 679,480 ESTs


Angiostrongylus
cantonensis
AAC
4 libraries
651 clusters
1,191 ESTs
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Ancylostoma
braziliense
ABC
1 library
18 clusters
19 ESTs
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Ancylostoma
caninum
ACC
15 libraries
26,356 clusters
78,935 ESTs
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Anisakis
simplex
AIC
1 library
321 clusters
473 ESTs
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Ascaris
lumbricoides
ALC
1 library
862 clusters
1,822 ESTs
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Ascaris
suum
ASC
38 libraries
13,708 clusters
55,343 ESTs
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Ancylostoma
ceylanicum
AYC
9 libraries
3,643 clusters
10,551 ESTs
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Brugia
malayi
BMC
25 libraries
9,961 clusters
25,844 ESTs
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Brugia
pahangi
BPC
2 libraries
28 clusters
28 ESTs
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Bursaphelenchus
mucronatus
BUC
1 library
2,265 clusters
3,191 ESTs
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Bursaphelenchus
xylophilus
BXC
6 libraries
6,679 clusters
13,338 ESTs
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Caenorhabditis
brenneri
CBC
3 libraries
10,221 clusters
29,443 ESTs
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Caenorhabditis
briggsae
CGC
1 library
1,451 clusters
2,406 ESTs
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Caenorhabditis
japonica
CJC
0 libraries documented
9,141 clusters
31,598 ESTs
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Caenorhabditis
remanei
CRC
2 libraries
9,214 clusters
20,166 ESTs
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Caenorhabditis
sp. 5 AC-2008
CSC
1 library
2,265 clusters
3,866 ESTs
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Ditylenchus
africanus
DAC
1 library
2,536 clusters
4,289 ESTs
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Dirofilaria
immitis
DIC
2 libraries
1,788 clusters
3,762 ESTs
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Dictyocaulus
viviparus
DVC
3 libraries
2,460 clusters
4,423 ESTs
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Globodera
mexicana
GMC
1 library
17 clusters
17 ESTs
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Globodera
pallida
GPC
4 libraries
2,586 clusters
3,900 ESTs
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Globodera
rostochiensis
GRC
6 libraries
4,594 clusters
11,658 ESTs
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Heterorhabditis
bacteriophora
HBC
8 libraries
10,593 clusters
42,354 ESTs
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Haemonchus
contortus
HCC
14 libraries
5,467 clusters
22,257 ESTs
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Heterodera
glycines
HGC
14 libraries
9,270 clusters
24,167 ESTs
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Heterodera
schachtii
HSC
3 libraries
1,378 clusters
2,791 ESTs
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Loa
loa
LLC
1 library
26 clusters
27 ESTs
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Litomosoides
sigmodontis
LSC
3 libraries
1,631 clusters
2,699 ESTs
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Meloidogyne
arenaria
MAC
5 libraries
2,671 clusters
4,979 ESTs
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Meloidogyne
chitwoodi
MCC
4 libraries
3,814 clusters
11,938 ESTs
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Meloidogyne
hapla
MHC
6 libraries
7,021 clusters
23,992 ESTs
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Meloidogyne
incognita
MIC
11 libraries
6,227 clusters
19,806 ESTs
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Meloidogyne
javanica
MJC
8 libraries
3,438 clusters
7,275 ESTs
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Meloidogyne
paranaensis
MPC
2 libraries
1,651 clusters
3,638 ESTs
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Necator
americanus
NAC
4 libraries
2,452 clusters
5,019 ESTs
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Nippostrongylus
brasiliensis
NBC
8 libraries
3,691 clusters
13,673 ESTs
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Onchocerca
ochengi
OCC
1 library
37 clusters
59 ESTs
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Oesophagostomum
dentatum
ODC
2 libraries
249 clusters
299 ESTs
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Onchocerca
flexuosa
OFC
2 libraries
1,527 clusters
2,063 ESTs
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Ostertagia
ostertagi
OOC
10 libraries
2,453 clusters
6,761 ESTs
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Onchocerca
volvulus
OVC
10 libraries
5,144 clusters
14,791 ESTs
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Parelaphostrongylus
tenuis
PAC
1 library
95 clusters
99 ESTs
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Pratylenchus
penetrans
PEC
1 library
418 clusters
1,919 ESTs
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Pristionchus
pacificus
PPC
11 libraries
10,638 clusters
35,736 ESTs
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Panagrolaimus
superbus
PSC
0 libraries documented
4,037 clusters
7,606 ESTs
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Parastrongyloides
trichosuri
PTC
6 libraries
3,146 clusters
7,776 ESTs
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Pratylenchus
vulnus
PVC
3 libraries
1,839 clusters
5,762 ESTs
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Radopholus
similis
RSC
5 libraries
3,876 clusters
7,164 ESTs
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Steinernema
carpocapsae
SCC
1 library
43 clusters
44 ESTs
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Steinernema
feltiae
SFC
1 library
74 clusters
83 ESTs
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Strongyloides
ratti
SRC
12 libraries
5,152 clusters
26,400 ESTs
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Strongyloides
stercoralis
SSC
3 libraries
3,708 clusters
11,365 ESTs
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Toxocara
canis
TCC
6 libraries
1,568 clusters
4,791 ESTs
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Teladorsagia
circumcincta
TDC
5 libraries
2,431 clusters
6,011 ESTs
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Trichostrongylus
vitrinus
TIC
2 libraries
359 clusters
367 ESTs
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Toxascaris
leonina
TLC
1 library
282 clusters
434 ESTs
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Trichuris
muris
TMC
3 libraries
3,067 clusters
6,891 ESTs
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Trichinella
spiralis
TSC
8 libraries
8,565 clusters
24,678 ESTs
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Trichuris
vulpis
TVC
1 library
1,263 clusters
2,959 ESTs
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Wuchereria
bancrofti
WBC
3 libraries
2,279 clusters
4,871 ESTs
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Xiphinema
index
XIC
7 libraries
4,626 clusters
9,283 ESTs
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Zeldia
punctata
ZPC
1 library
210 clusters
390 ESTs
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the content of these pages is copyright Mark Blaxter and colleagues. Contact us at BaNG if there are problems.