Choose database to search: Individual Nematode Species (Nucleotide) Groups of Nematodes (Nucleotide) C.elegans Genome (Nucleotide) EST Consensi Databases (Nucleotide) Protein Databases
Program blastn tblastn tblastx Database Ancylostoma Ascaris lumbricoides Ascaris suum Brugia malayi Globodera Haemonchus contortus Heterodera glycines Litomosoides sigmodontis Meloidogyne Necator americanus Nippostrongylus brasiliensis Onchocerca volvulus Ostertagia ostertagi Parastrongyloides trichosuri Pratylenchus penetrans Pristionchus pacificus Strongyloides Teladorsagia circumcincta Toxocara canis Trichinella spiralis Trichuris muris Trichuris vulpis Wuchereria bancrofti Zeldia punctata Perform ungapped alignment Databases updated every Sunday
The query sequence is filtered for low complexity regions by default. Enter here your input data as sequence in FASTA format
Alignment view Pairwise query-anchored showing identities query-anchored no identities flat query-anchored, show identities flat query-anchored, no identities query-anchored no identities and blunt ends flat query-anchored, no identities and blunt ends XML Blast output tabular Expect 0.0001 0.01 1 10 100 1000 Descriptions 0 10 20 50 100 250 500 Alignments 0 10 20 50 100 250 500
You may also want to use the parasite blast server at the EBI